| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2769 |
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| Symbol | |
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| ID | 5454890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2967077 |
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| End bp | 2968840 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878350 |
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| Product | AsmA family protein |
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| Protein accession | YP_001414034 |
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| Protein GI | 154253210 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.961536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.388317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAT TTCTTCGATT TGTCGTCGTT CTCGCCTTGC TCGTCGCCGG CGGGCTCTAT
GCGCTCACCT TTGTCGATCT CGGCCGCTTC AAGCCGCAGA TCGAGGCGGC GGCGCAGGAT
GCAACGGGCC GTACACTGAA GATCGAAGGG CCGCTCAATA TCGGCTTCTC GCTGGTGCCG
ACGGTCGTCA CGGAGAAGAT CAGCTTCCAG AACGCGGATT GGGGCACCAG GCCGCAGATG
GTCACGGCGG AAAAACTCCG CCTCCAGCTC GCGCTGCTGC CGCTCCTCAC TGGCAATGTC
GATGTCCGCG AGGTCACGCT CGAAGGGGCG GATGTCTATC TCGAAACCGA CAGGCGCGGC
CGGGGCAACT GGGAGTTCGG CGAGGCGGGC GCGCAGCCGG CGGCAGATGA AAGCGCGGGC
GGCGGCATGT CGCTGGCCGG TGTACCGCAG ATCGAAATCC GCAACCTCGC AATCGCCTAT
CGCGATGGTC AGACAGGCAA GGTCAGCGAC GGCTCTTTCG AGGAAGTTTC GCTGCTGGAC
CGCGCGGGCG GCTTCCATGT GGTGGTCGAG GGCATAGTCA CGGGCTCGAA GGTTTCCTTC
AGCGCCGATG TCGAGGGCGA CATGCAGCAG GCGACCTTGA GCGACGCCTC CCTCACCGTC
GCCGGTACCA GCATCGGCGG CGACCTCGCG CTCGACATGC GCAACCGTCC GAAGCTGACC
GGCGCGCTCT CCGGCACCGC CTTCGACGTC ACGCCCTTCC TTTCGGGCGG TGGCGAAGGC
AAGGGCGGTC CCGTCTTCAG CCGCGATCCG CTGCCGCTCG ATGCGCTCAC GGTCGCCGAT
GCCGACATCG ATCTCACGCT GGGCGAGCTG CGCTATGGCA AGGTCAGCCT CACAAGTCTC
AAGCTGCCGC TGAAGCTCAC GGGTGGCAAG CTCGCGGCGC CGCTCACCGC GGAATATCGC
GGTTCGCCGG TCAAGCTCGC CATCAATGCG GATGGCGGCG CAAATCGCGT CAATGTCGAT
GTGAACGCGG CGAATTTCGA CATCGGCAAA TTGCTCGCCG ATCTCGATGT CAGCACCATG
CTGAATGCCC GTGCAGATTT CGGCGCCAAG CTCGCGGGCG GCGGCAAGTC GATGCATGCC
ATCGCATCCT CTCTTTCCGG CCAGACCAAC CTTGTCATCG GCAAGGGCAC GATCAATTCG
CGCGCGCTCG CCATCGTTTC GGACGATCTC GTGAATGTGC TGATCCCGAA TGGCGAAAGC
GGCGAAACGG CGCAGCTCAC CTGCGCCATC AGCCGGTTCG ATTTCCAGGG CGGCGTCGGC
AAGGCGACGG CACTGGCGCT CGAAACCAAC ACGCTGCTGA CGACGGGCTC CGGCACGGTC
GATCTCGGCA AGGAACGGGT GGATCTCCTC TTCAAGCCGA AGCCCAAAAA GGCGAGCCTC
GTCAGTCTCG CTTTCCCTGT CCGCCTCTCT GGCCCGCTCA CATCGCCCAC CGCCGGCCTC
GATCGCACGG GCGTCGTCAC AGGCGTTGCC ACCGCCGTCG CCGGTACGGC GCTCACCGGC
GGCATCGGCG CGCTCCTGCC GTTGATGAGC ACAGGCTCGT CCGTTGTCTC GGGCGGCGAT
TGCGCTGCCG CCGCCGCCGC CGCAAAGGAA TCCTCCGGCG GCATCACCGG CACGATCGGC
GGCGCGGCCG AAGGCGCCGC CAAGGGCGCG GGCGATGTCC TCGAAGGCAT CGGCAAGGGC
CTCGGCGGCA TCTTCGGGAA CTGA
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| Protein sequence | MRKFLRFVVV LALLVAGGLY ALTFVDLGRF KPQIEAAAQD ATGRTLKIEG PLNIGFSLVP
TVVTEKISFQ NADWGTRPQM VTAEKLRLQL ALLPLLTGNV DVREVTLEGA DVYLETDRRG
RGNWEFGEAG AQPAADESAG GGMSLAGVPQ IEIRNLAIAY RDGQTGKVSD GSFEEVSLLD
RAGGFHVVVE GIVTGSKVSF SADVEGDMQQ ATLSDASLTV AGTSIGGDLA LDMRNRPKLT
GALSGTAFDV TPFLSGGGEG KGGPVFSRDP LPLDALTVAD ADIDLTLGEL RYGKVSLTSL
KLPLKLTGGK LAAPLTAEYR GSPVKLAINA DGGANRVNVD VNAANFDIGK LLADLDVSTM
LNARADFGAK LAGGGKSMHA IASSLSGQTN LVIGKGTINS RALAIVSDDL VNVLIPNGES
GETAQLTCAI SRFDFQGGVG KATALALETN TLLTTGSGTV DLGKERVDLL FKPKPKKASL
VSLAFPVRLS GPLTSPTAGL DRTGVVTGVA TAVAGTALTG GIGALLPLMS TGSSVVSGGD
CAAAAAAAKE SSGGITGTIG GAAEGAAKGA GDVLEGIGKG LGGIFGN
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