| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2726 |
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| Symbol | |
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| ID | 5455382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2931004 |
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| End bp | 2931705 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878307 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_001413991 |
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| Protein GI | 154253167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.181132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.31349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG CAGGAAAGCG TATTGAGAAG GCTCGCGAGG GCATCGACCG CAAGAAGACT
TATGGCCTCG ACGAGGCTGT GAAGATGGTC AAGGACCGTG CGAGCGTGAA GTTCGACGAG
ACCATCGAAG TTGCGATCGC TCTCGGCGTC GACCCGCGTC ACGCGGACCA GATGGTTCGC
GGCGTCGTGG CGCTACCGAG CGGTTCAGGC CGTACCGTCC GTGTTGCGGT TTTCGCAAAG
GGCGACAAGG CTGACCAGGC GCGCGCGGCA GGTGCGGATA TTGTCGGTGA CGACGATCTC
GCCGAGATCG TGCAGTCGGG CAAGATCGAC TTCGATCGTT GCATTGCAAC GCCGGACATG
ATGCCGCTGG TCGGCCGTCT CGGTAAGGTG CTCGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTAGGCA CGGTGACGCC GGATGTCGCA GAGGCCGTGA AGGCGGCCAA GGGTGGCGCC
GTCGAATTCC GCGTCGAGAA GGCGGGCATC ATTCATGCCG GTGTCGGCAA GGCGAGCTTC
AGCGAAGACC AGATCCTGGT GAATATCCGG GCGCTGATTG ACGCGGTGCA GAAGGCCAAG
CCGACGGGTG CCAAGGGCAC CTACATCAAG CGCATCGCGA TCAGCTCGAC GATGGGCCCC
GGCGTAAAGG TCGAGCCGCA GAGCGTTGCG GCGAGCGCGT AA
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| Protein sequence | MAKAGKRIEK AREGIDRKKT YGLDEAVKMV KDRASVKFDE TIEVAIALGV DPRHADQMVR
GVVALPSGSG RTVRVAVFAK GDKADQARAA GADIVGDDDL AEIVQSGKID FDRCIATPDM
MPLVGRLGKV LGPRGLMPNP KVGTVTPDVA EAVKAAKGGA VEFRVEKAGI IHAGVGKASF
SEDQILVNIR ALIDAVQKAK PTGAKGTYIK RIAISSTMGP GVKVEPQSVA ASA
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