| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2692 |
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| Symbol | |
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| ID | 5453729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2893827 |
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| End bp | 2897102 |
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| Gene Length | 3276 bp |
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| Protein Length | 1091 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878269 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001413957 |
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| Protein GI | 154253133 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.246578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCC TGTTGATTGC CAATCGCGGT GAAATTGCCG TGCGCATTGC GCGCGCGGGT
GCGGAACTCG GATTGCGGAC TGTCGGGGTC TATGCGGAGG ATGATGCGCT GTCGCTGCAT
GTGCGGGCGG CGGACGAGGC GTTGCCGCTG ACCGGCACGG GGGCAGCCGC CTATCTCGAC
ATCAAGCAGA TCGTGGCCGA GGCGAAGCAG GCGGGATGCG ACGCGATCCA TCCGGGCTAT
GGCTTCCTGA GCGAGAATGC GGCTTTCGCG GAAGAATGCG CGAAGGAGGG GATTATTTTC
GTCGGACCTT CGCCCGAGGC GCTGCGGCTG TTCGGCGACA AGGCCAAGGC GCGGGCGCTC
GCCGAGAAAG AGGGTGTGCC GCTTTTTCCC GGCACGAACG GCGCCACGAG CCTCGAAGAG
GCGCGGGCTT TCATGGAGAA GGTGAAGGCG CCGATCATGC TGAAGGCGCT GGCGGGCGGC
GGCGGCCGCG GGATGCGCGC CGTCACCGAC ATCAAGGAAT TGCCGGAAGC CTATGAACGC
TGCCGCTCGG AAGCGACGGC GGCATTCGGC AGCGGCGACC TCTATGCCGA GAAGCTGGTG
CGGAAAGCGC GGCACATCGA AATCCAGATC GTCGGCGACG GCAAGGATGT GATCGATCTC
GGCGAGCGCG AATGCACGCT GCAGCGGCGG AACCAGAAGG TGGTGGAGGT TGCGCCAAGC
CCGACGCTCG ACGCAGGGCT TCGCAAGCGG CTGGTGGAGG CGGCGCGGAA GCTGGCGGGC
GCGGCGAACT ACAAGGGGCT TGGCACGTTT GAATTCCTGA TCGACATGGA AGCGAAAAGC
GCGGAGAGCG CGATTGCCTT CATGGAGGCC AATCCGCGAT TGCAGGTGGA GCATACCGTC
ACCGAAGAAG TGACGGGGGT CGACCTCGTG AAGACGCAGC TCAGGATCGC GGGCGGCGCG
ACGCTGAAGG AAGTGGGGCT GACGGAGACG CCAAGCCCTC GCGGTTTCGC GATCCAGCTT
CGCGTGAACA TGGAGCGGAT GAACGAGACG GGCGAGGCTG TGCCGACGGG CGGCGTGCTC
AATACGTTCA ACCCGCCTTC GGGGCCGGGC ATTCGCGTCG ACACGTTCGG CTATGCCGGA
TACCGCACGA GCCCGAACTA CGACTCGCTG CTGGCGAAGC TGATCGCACA TTCGCCGGCG
CCGGACTATG CGGCGGCGGT GGCGCGGGCG CGGCGCGCGC TCAGTGAATT CCAGATCGAG
GGCGTGACGA CGAATATTTC GTTCCTGCAG GCGCTGATGG CGCGGGACGA CGTGCAGGCG
AATGAGGTGA GCACGGGCTT CATCGCGGAA CATGCGGGCG AGCTGGCAAA GGCGGAGGCG
ACACCGGGGC GCTATTTCAC CGGCGGGAAC GGTACGGGCG CGGCGGCGGC TGCCAGACAT
GTGGAAGGGC CGGCGGGGAC GACGCCTGTT CCTTCGTCGA TGCAGGGCAA GGTGATTTCC
GTCGATGTGG CGGAAGGCGC GACGGTTGCG AAGGGACAGC AGATCGCGGT GCTCGAAGCG
ATGAAGATGG AGCACACCAT CGCGGCGCCG TTCGGCGGCA CGGTGCGGAA AATCGCCGCC
GTGACGAATG CAACGCTGAT GGAGGGAGAG CCGATCCTCT TCATCGAAGA GGGCGCGGGC
GACGACGCGG CGGCGGTGAC GGAAGAAGCG GTCGATCCCG ATTACATCCG CCCCGACCTG
CAACATGTGA TCGAGCGGCA TGCGCTGGGG CTCGACGAGA ACCGGCCGGA CGCTGTGGCG
CGGCGGCGCA AGCGCAACCA GCGGACGGTG CGCGAGAATA TCGACCAGCT CTGCGACGAG
GGGAGCTTCA TCGAATATGG CGCGCTGGCG CTGGCCGCGC AGCGGAGGCG GCGCTCGCTG
GAGGAGCTTC TGAAGATGAG CCCGGCGGAC GGGCTGGTGT CGGGCATCGG CACTGTGAAC
GCCTCGCTCT TCGGCGAAGA GAAGGCGCGC GCGATGGTGA TGGGCTACGA CTTCACCGTG
TTCGCAGGGA CCCAGGGTGC GATGAACCAC AAGAAGATGG ACCGCATGCT CTTCCTCGCG
CGGGACCAGA AGCTGCCCAT CGTGCTGCTG GCGGAAGGCG GCGGCGGGCG GCCGGGCGAC
ACGGACACGG CGGGCGTTGC CGGTCTCGAC ACGCCGAGCT TCCACACGTT TGCGACGCTT
TCAGGCAAGG TGCCGCTTGT CGGCATGACG GCGGGGCGGT GCTTCGCGGG GAATGCGGCG
CTGCTCGGCT GCTGCGACGT CATCATCGCG ACGGCGGATT CCAATATCGG CATGGGCGGC
CCGGCGATGA TCGAGGGGGG CGGGCTCGGC GTTTATGCGC CCGAGGATAT CGGCCCGGCG
GCGGTTCACC GCAAGAATGG CGTCATCGAT ATTTTCGTGA AGGACGAAGA AGAAGCGATC
GAGGCCTGCC AGAAGTATCT TTCGTATTTT CAAGGTGCGG TGGAGAAGTG GGAGGAGAGC
GACCAGCGGC TATTGCGCCA CATGATCCCC GAGAACCGGT TGCGCGCCTA TGACATCGAC
AAGGTGATCG AGGGCGTGGC GGACAAGGGA TCGGTGCTGG AACTCAGGCG CGAATTCGGT
ATCGGCATCA AGACGGCGCT TATCCGCATG GAAGGGCGGC CGATGGGGCT GATGGCGAAC
AATCCCTATC ATCTCGGCGG CGCCATCGAC GCGGAGGCAG CGGACAAGGC GGCGCGCTTC
ATGCAGCTTT GCGATGCGTT CGGGCTGCCG ATCCTGTCGC TCTGCGACAC GCCGGGCTTC
ATGGTGGGGC CGGAGATCGA GAAAGAGGCG CAGGTGCGCC ATGTCAGCCG CATGTTCGTG
ACGGCGGCGA ATATGAGCGT GCCGCTCTTC GCGGTGGTGC TGCGCAAGGG CTATGGGCTC
GGCGCGCAGG CGATGACGGC GGGGAGCTTT CATGCGCCGT TCTTCAACAT CTCCTGGCCG
ACGGGCGAAT TCGGCGGCAT GGGCCTCGAA GGGGCGGCGC GGCTCGGCTA TCGCCGCGAG
ATGGAGGCGA TCGAAGACCC GGAGGAGCGC GACGCCTTCT ACCGCAAGAT GGTCGACCGC
TATTACGAGA ACGGAAAGGC GACCAATATG GCCGCCTTCC TAGAAATCGA CGCGGTGATC
GATCCGGCGG AGACAAGGCA CTGGATCACG CGGGGCTTGA AATCGCTGCC GCCGATGGAA
GCGAAACCCT CCCGCGCCTT CATCGATACG TGGTGA
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| Protein sequence | MKSLLIANRG EIAVRIARAG AELGLRTVGV YAEDDALSLH VRAADEALPL TGTGAAAYLD
IKQIVAEAKQ AGCDAIHPGY GFLSENAAFA EECAKEGIIF VGPSPEALRL FGDKAKARAL
AEKEGVPLFP GTNGATSLEE ARAFMEKVKA PIMLKALAGG GGRGMRAVTD IKELPEAYER
CRSEATAAFG SGDLYAEKLV RKARHIEIQI VGDGKDVIDL GERECTLQRR NQKVVEVAPS
PTLDAGLRKR LVEAARKLAG AANYKGLGTF EFLIDMEAKS AESAIAFMEA NPRLQVEHTV
TEEVTGVDLV KTQLRIAGGA TLKEVGLTET PSPRGFAIQL RVNMERMNET GEAVPTGGVL
NTFNPPSGPG IRVDTFGYAG YRTSPNYDSL LAKLIAHSPA PDYAAAVARA RRALSEFQIE
GVTTNISFLQ ALMARDDVQA NEVSTGFIAE HAGELAKAEA TPGRYFTGGN GTGAAAAARH
VEGPAGTTPV PSSMQGKVIS VDVAEGATVA KGQQIAVLEA MKMEHTIAAP FGGTVRKIAA
VTNATLMEGE PILFIEEGAG DDAAAVTEEA VDPDYIRPDL QHVIERHALG LDENRPDAVA
RRRKRNQRTV RENIDQLCDE GSFIEYGALA LAAQRRRRSL EELLKMSPAD GLVSGIGTVN
ASLFGEEKAR AMVMGYDFTV FAGTQGAMNH KKMDRMLFLA RDQKLPIVLL AEGGGGRPGD
TDTAGVAGLD TPSFHTFATL SGKVPLVGMT AGRCFAGNAA LLGCCDVIIA TADSNIGMGG
PAMIEGGGLG VYAPEDIGPA AVHRKNGVID IFVKDEEEAI EACQKYLSYF QGAVEKWEES
DQRLLRHMIP ENRLRAYDID KVIEGVADKG SVLELRREFG IGIKTALIRM EGRPMGLMAN
NPYHLGGAID AEAADKAARF MQLCDAFGLP ILSLCDTPGF MVGPEIEKEA QVRHVSRMFV
TAANMSVPLF AVVLRKGYGL GAQAMTAGSF HAPFFNISWP TGEFGGMGLE GAARLGYRRE
MEAIEDPEER DAFYRKMVDR YYENGKATNM AAFLEIDAVI DPAETRHWIT RGLKSLPPME
AKPSRAFIDT W
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