| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2680 |
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| Symbol | |
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| ID | 5454100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2880578 |
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| End bp | 2882317 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878257 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001413945 |
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| Protein GI | 154253121 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGATC TCATCATTCG CGGCGGACTG CTGGCCGACG GCACGGGCGC GCCCGCGCGC
ATCGCCGACG TCGCCATCGA CAACGGCATC GTCACCGAAG TCGGCACCGT TACCGGTACC
GCAAGGCGCG AGATCGACGC GACCGGCCTC GTCGTCACGC CGGGCTGGGT CGACATCCAC
ACGCATTACG ACGGCCAGGT CACATGGGAC CCGCTCCTTT CGCCCTCTTG CTGGCATGGC
GTGACGACGG TCGTAATGGG CAATTGCGGC GTCGGCTTCG CGCCCGCCCG GCCCGACAAG
CATGATTGGC TCATCAGCCT CATGGAAGGC GTAGAGGATA TCCCCGGTGC CGCACTCGCC
GAAGGCATCG AGTGGAACTG GGAAACCTTC CCCGAATATA TGGACAGCCT CGACAAGCAG
AAGCGCGTGC TCGATGTCGC GACGCAGGTG CCGCATGGCT CCGTCCGCGC CTATGTGATG
GGCGAGCGCG GCGCACGCAA CGAAGCCGCG ACCGACGAAG ACATTGCCGC GATGGCGAAG
ATCGTCGAGG AAGGCATCGC CGCAGGCGCG CTCGGCTTCT CGACCTCGCG CACCATGCTG
CATCTCTCGA AGGACGGCGA ACCCGTCCCC GGCACCTTCG CCAACAAGGC GGAGCTGATG
GGCATTGGCC GCGCACTCGG CAAGGCGGGC CACGGCGTCT TCGAAATGGC GTCGGACATG
ACGCCGGCCG AAGAGGAATT CAACTGGATG AAGGAGCTTT CCGCGGAGAC GGGCCTTCCC
GTCACCTATG CCCTGCTCCA GTCGCCCGTC GAACCGGACA AGTGGCGCGA CATGCTCCGT
CTCACCGACG AAGCCCGCAA GCAAGGCGCC AATGTCACCG CGCAGATCGC CTGCCGCCCC
ACCGGCATGG TGCTCGGCTG GCAGAGCACG GTGCATCCCT TCATCGCGCA TCCCGCTTAT
TACGAGATTG CCGCTCTTCC TTTCGCCGAG CGTCTCGAAA AGCTGAAGGA CCCGGAAATC
CGCGCCCGCA TCATCGCAGA TCAGCCGCGC GAGTTCGGCC CCCTCGGCAG TATCCTGACC
AAGGGCTTCG ATCGCATGTT CCGGCTTGAA AATACCGGCA CGCTTGAATA CGAGCCCCGC
GCCGAAGACA GCGTCGCCGC CCTTGCGGAG CGCACGGGCA GGAACCCCGC CGAAATCGTC
TATGACATGC TGATGGAGAA GGACGGCCGG GGATATGTCT ACCTGCCGCT CCTCAACTAC
ACGCTCTTCA ACTTCGACCA CATCCACGAA ATGATGCGCC ACCCGGCAAC GGTGCTGAGC
CTGTCCGACG GCGGCGCGCA TTGCGGCGTC ATCTGCGATG CGAGCTTCCC CACCTACATG
CTGACGCATT GGGTGCGCGA CCGTTCGCGC GGCGAGCGTC TGCCGCTCGA GGAAGTGGTG
CGCATGCAGA CGCACGATAC GGCTCGCCTC TACGGCCTCA ACGATCGCGG CGTCGTGGCG
CCCGGCATGA AGGCGGATCT CAACATCATC GACCTGGAGA AACTCCGCAT CCTCGCGCCG
GAGATGGTCT TCGACCTTCC CGCCGATGGC CGCCGCATGA TCCAGCGCGC CGACGGCTAC
CGCGCCACCA TCGTCAACGG CGCGGTCACT TTCGAAAACG GAGAAGCGAC AGGCGAAATG
CCCGGCCGCC TCATCCGTGG CCCGCAGCGT CAGGTCCCGT CCGTTCAGGC GGCGGACTAA
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| Protein sequence | MHDLIIRGGL LADGTGAPAR IADVAIDNGI VTEVGTVTGT ARREIDATGL VVTPGWVDIH
THYDGQVTWD PLLSPSCWHG VTTVVMGNCG VGFAPARPDK HDWLISLMEG VEDIPGAALA
EGIEWNWETF PEYMDSLDKQ KRVLDVATQV PHGSVRAYVM GERGARNEAA TDEDIAAMAK
IVEEGIAAGA LGFSTSRTML HLSKDGEPVP GTFANKAELM GIGRALGKAG HGVFEMASDM
TPAEEEFNWM KELSAETGLP VTYALLQSPV EPDKWRDMLR LTDEARKQGA NVTAQIACRP
TGMVLGWQST VHPFIAHPAY YEIAALPFAE RLEKLKDPEI RARIIADQPR EFGPLGSILT
KGFDRMFRLE NTGTLEYEPR AEDSVAALAE RTGRNPAEIV YDMLMEKDGR GYVYLPLLNY
TLFNFDHIHE MMRHPATVLS LSDGGAHCGV ICDASFPTYM LTHWVRDRSR GERLPLEEVV
RMQTHDTARL YGLNDRGVVA PGMKADLNII DLEKLRILAP EMVFDLPADG RRMIQRADGY
RATIVNGAVT FENGEATGEM PGRLIRGPQR QVPSVQAAD
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