| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2676 |
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| Symbol | |
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| ID | 5454125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2875958 |
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| End bp | 2876686 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640878253 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001413941 |
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| Protein GI | 154253117 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.80155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGCG GCGCGGGGCG AAAGCCGAGG GGCATCCTGT TCGACAAGGA TGGAACCTTG
TTCGACTATC ACGGAACCTG GGGCCCGATC CTCGTCGAAG CGGCTGAAAT GGCCGCGCGT
GAGCGGCGCG ACCTTGTGCC GGAGATGCTG TCGGTCATTG GCTTCGATCC GGCGACGGCG
CGGGTCGCGG CGGGCAGCAT TGCCGGGGCG GGAGATACGT TCGGGCTGGT GGATGCGTGG
ATCACGATTG CCGGCGGGTG GGAGAGGGCG GCGCTGATCG CGGCGCTGGA CGGGCTCTTC
ATCCGGCTGG CGCCGGAGCG GTCGCTGCCG GTGACGGATC TGCCGGTGTT CTTCAGGGGG
CTGAAGGACA GGGAGATCAG GACAGGCATT GCCACCAACG ATGTGGCGGA ATCGGCGCGG
GCGACGATCC TGCGGTTCGG GCTTGAGACC TATATCGAAT TTTCGGCCGG GTATGACAGC
GGGCATGGGC AGAAGCCGGG GCCGGGCATG GCGCTCGCCT TTTGCGCGGC GGTGGGGCTC
GCGCCCCATG AGATTGCCGT GGTGGGGGAC AACAGCCATG ACCTCGAAAT GGGCCGAAGG
GCGGGCGCGG CGCTCAATAT CGGCGTGCTG ACGGGGACTA GCGGGCGCGA CGATCTCGCG
CCGCTTGCCG ATCACGTTAT CGGGAGCATT GCGGAACTGC CGGCGCTGCT GGACGAGCTG
GGCGGCTAG
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| Protein sequence | MAGGAGRKPR GILFDKDGTL FDYHGTWGPI LVEAAEMAAR ERRDLVPEML SVIGFDPATA
RVAAGSIAGA GDTFGLVDAW ITIAGGWERA ALIAALDGLF IRLAPERSLP VTDLPVFFRG
LKDREIRTGI ATNDVAESAR ATILRFGLET YIEFSAGYDS GHGQKPGPGM ALAFCAAVGL
APHEIAVVGD NSHDLEMGRR AGAALNIGVL TGTSGRDDLA PLADHVIGSI AELPALLDEL
GG
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