Gene Plav_2666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2666 
Symbol 
ID5454108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2867762 
End bp2868262 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID640878243 
ProductNifU domain-containing protein 
Protein accessionYP_001413931 
Protein GI154253107 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.394338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACG AAATCTACAA CAAGCGCATT CTCGAACTCG CATCGGATAT TCCGCATGGC 
GAGCGGCTTG CCGCGCCTGA CGCCTCGGCG ACGGCGGTGT CGAAGCTCTG CGGCTCCAAG
GTGACGGTCG ATGTGAAGCT CGACGGCGAG GGTCGGGTTG TGGATTACGG CGCCGACGTG
AAGGCGTGTG CGCTGGGGCA GGCGTCGTCC TCTATCATGG CGCGGCATGT GATCGGCGCG
AGCGCGGCCG AGCTGCACGA GATCGGCGCT GCGATGAGGC GGATGCTGAA GGAAGGCGGC
GAGCCGCCGC GCGAGATCTA TGGCGGCAAG TGGAAAGACC TCGAAGTGCT GGAGCCTGTG
CGCGAGTACA AGGCGCGGCA TGCCTCGACG TTGCTCGTAT TCGACGCGGT GGAAGAGGCG
GTGGACGCCG CGCTGGCCGA AAAAGGGAGT GGTACTGCGC CGCAGACCGG GACCCTCACT
AGCACCGGCC CGGCCGCTTA G
 
Protein sequence
MLNEIYNKRI LELASDIPHG ERLAAPDASA TAVSKLCGSK VTVDVKLDGE GRVVDYGADV 
KACALGQASS SIMARHVIGA SAAELHEIGA AMRRMLKEGG EPPREIYGGK WKDLEVLEPV
REYKARHAST LLVFDAVEEA VDAALAEKGS GTAPQTGTLT STGPAA