Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2666 |
Symbol | |
ID | 5454108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2867762 |
End bp | 2868262 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878243 |
Product | NifU domain-containing protein |
Protein accession | YP_001413931 |
Protein GI | 154253107 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.394338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAACG AAATCTACAA CAAGCGCATT CTCGAACTCG CATCGGATAT TCCGCATGGC GAGCGGCTTG CCGCGCCTGA CGCCTCGGCG ACGGCGGTGT CGAAGCTCTG CGGCTCCAAG GTGACGGTCG ATGTGAAGCT CGACGGCGAG GGTCGGGTTG TGGATTACGG CGCCGACGTG AAGGCGTGTG CGCTGGGGCA GGCGTCGTCC TCTATCATGG CGCGGCATGT GATCGGCGCG AGCGCGGCCG AGCTGCACGA GATCGGCGCT GCGATGAGGC GGATGCTGAA GGAAGGCGGC GAGCCGCCGC GCGAGATCTA TGGCGGCAAG TGGAAAGACC TCGAAGTGCT GGAGCCTGTG CGCGAGTACA AGGCGCGGCA TGCCTCGACG TTGCTCGTAT TCGACGCGGT GGAAGAGGCG GTGGACGCCG CGCTGGCCGA AAAAGGGAGT GGTACTGCGC CGCAGACCGG GACCCTCACT AGCACCGGCC CGGCCGCTTA G
|
Protein sequence | MLNEIYNKRI LELASDIPHG ERLAAPDASA TAVSKLCGSK VTVDVKLDGE GRVVDYGADV KACALGQASS SIMARHVIGA SAAELHEIGA AMRRMLKEGG EPPREIYGGK WKDLEVLEPV REYKARHAST LLVFDAVEEA VDAALAEKGS GTAPQTGTLT STGPAA
|
| |