Gene Plav_2659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2659 
Symbol 
ID5454021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2860711 
End bp2861310 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content65% 
IMG OID640878236 
Producthypothetical protein 
Protein accessionYP_001413924 
Protein GI154253100 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.765719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.533611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC GCTTCGGCCT CGCCCTCATC GCCCTCGCGC TCGGGCAATC GCTTTTCCTC 
GCTGTCATGG TCTGGGACCG CGTCTCGCTG CTCCGCTCCG AAAGCGTCGT CACATTGAAG
ACAGAGCCCG TCGACCCGCG CGATCTCTTC CGCGGCGACT ACGTCATCCT GAACTACGAA
ATATCGCGCC TCCGCCTCGA CACCCTTGAA GGCGACGATG GCTTCGCGCA GGGCGACACG
ATCCATGTCG AACTCGCGCC CGCCGGCGAT CTCTGGCAGC CCGTCGCCGC ATGGCGCGAC
CATCGCGAAC CGGCAGCGGG AAATGAAATC ATCCGCGGCC GCGTTTCCTG GGTCATCGAC
GCCCGCCCCG TGGCCTCGCC CGCCGATGGC GAAGAAATGC CCTGCCTCGA TTGCGGCACC
GCCACCATCG CCTATGGCAT CGAAAGCTAC TTCGTACCCG AAGGCGAAGG CCGCTCGCTG
GAGGACCAGC GCAACGCTGG AAATCTCACC GTCGATGTGG CGCTCGGCAG AGACGGCGAA
GGGGCGATCA AGCGCCTTCG TCTCGAAGGC GAACCCGTCT ACGAGGAACC GCTTTTCTGA
 
Protein sequence
MNARFGLALI ALALGQSLFL AVMVWDRVSL LRSESVVTLK TEPVDPRDLF RGDYVILNYE 
ISRLRLDTLE GDDGFAQGDT IHVELAPAGD LWQPVAAWRD HREPAAGNEI IRGRVSWVID
ARPVASPADG EEMPCLDCGT ATIAYGIESY FVPEGEGRSL EDQRNAGNLT VDVALGRDGE
GAIKRLRLEG EPVYEEPLF