Gene Plav_2649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2649 
Symbol 
ID5455470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2852751 
End bp2853251 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content58% 
IMG OID640878226 
Producthypothetical protein 
Protein accessionYP_001413914 
Protein GI154253090 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.799269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCA GTCACACATT CATCGCCGTG GGATCCGCCG TGTTTGTTGC TGTCGTCTCC 
CACACTGCGC TCGGCACCCT CGCCCAGGCG GTTACGCAGG AAACTCCTGT GGGCACCTGG
CGGGTGATCG ACGATAAATC CGATCGTGCG AAAGGCATCG TCGAAATAAG CGAAGTTAAT
GGCGAACTGA AGGGCAAGGT TGTCCGTGTG CTTGATCAGG AAAATCAGAC AGGACCGGCC
ATCTGCAAGA GTTGCCCGGG GGAGCTGAAA GGTGAGCCGA TAGAAGGCAT GACCGTCCTT
TGGGGTTTTG AGCGCGAAGG CGACCAATGG GCCGATGGCA AAATTCTCGA TCCGAGCAAT
GGCCGGATTT ACAGCGCCTC TCTCCAGATG GACGAAGCAG GCGAGAAGCT CGACGTGCGG
GGCTATGTCG GGATTTCGTG GCTTGGCCGC ACCCAAGTCT GGGAACGGGC GGACGAGGCA
GCCGAGCTCG AAAATAAATA G
 
Protein sequence
MFASHTFIAV GSAVFVAVVS HTALGTLAQA VTQETPVGTW RVIDDKSDRA KGIVEISEVN 
GELKGKVVRV LDQENQTGPA ICKSCPGELK GEPIEGMTVL WGFEREGDQW ADGKILDPSN
GRIYSASLQM DEAGEKLDVR GYVGISWLGR TQVWERADEA AELENK