Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2620 |
Symbol | |
ID | 5453377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2826184 |
End bp | 2826984 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640878197 |
Product | enoyl-CoA hydratase |
Protein accession | YP_001413885 |
Protein GI | 154253061 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.124427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0671536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCATCT CCTCCCCCAC CTCGAAAATG ATCGCCGAGA AAACCGGCGC GATCGGCTGG ATGATCTTCA ACAATCCCGA ACGCCTGAAC GCCGTCGGCC TCGAGATGTG GCAGGCCGTG CCGCAAATCC TCGCGGATTT CGAGAGCGAT CCGGAGATCC GCGTCATCGT GCTGAAGGGC GCGGGCGGCA AGGCCTTCGT CGCCGGCGCC GACATTTCGC AATTCGGCGA AAGCCGCTCC ACGGCGGAAG GCATCCTCGC CTACGAAACG GCAACCGAAG TGGCCTTCAA CGCCATCGCC GATACTGCAA AGCCCACCAT CGCCATGATC GACGGCTACT GCATCGGCGG CGGCCTCGGC ATCGCGCTCT CTTGCGACAT GCGCATCGCC GCCGAAGGCT CCACCTTCGG CATTCCCGCC GCAAAGCTTG GCCTCGCCTA TGGCGCCGGC GGCACCGGCC GCCTGGTGCA TGTCGTCGGC CCCTCCTTCG CCAAGGAAAT CTTCTACACC GCCCGCCGTT TCACGCATGA GGAAGCCCTC GCCATGGGCC TCGTCAACCG CGTGACGACA AAGGACGCAT TGGAAAATTT CGTCCGGGAT TACTGCGCCC TCATCGCCGA AAACGCGCCG CTCACCGTCG GCACCGCCAA ACAGGTCGTG GACGAATTCA CGAAAGCACC CGGCAATTTC GACGCCGCGA AATGCGACGC CCTCATCGCC CGCTGCTTCG CCAGCGACGA CTACAAGGAA GGCCGCGCCG CCTTCATGGA AAAAAGAAAG CCGGTGTTCA AGGGCCGGTA G
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Protein sequence | MSISSPTSKM IAEKTGAIGW MIFNNPERLN AVGLEMWQAV PQILADFESD PEIRVIVLKG AGGKAFVAGA DISQFGESRS TAEGILAYET ATEVAFNAIA DTAKPTIAMI DGYCIGGGLG IALSCDMRIA AEGSTFGIPA AKLGLAYGAG GTGRLVHVVG PSFAKEIFYT ARRFTHEEAL AMGLVNRVTT KDALENFVRD YCALIAENAP LTVGTAKQVV DEFTKAPGNF DAAKCDALIA RCFASDDYKE GRAAFMEKRK PVFKGR
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