Gene Plav_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2620 
Symbol 
ID5453377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2826184 
End bp2826984 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID640878197 
Productenoyl-CoA hydratase 
Protein accessionYP_001413885 
Protein GI154253061 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.124427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0671536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCATCT CCTCCCCCAC CTCGAAAATG ATCGCCGAGA AAACCGGCGC GATCGGCTGG 
ATGATCTTCA ACAATCCCGA ACGCCTGAAC GCCGTCGGCC TCGAGATGTG GCAGGCCGTG
CCGCAAATCC TCGCGGATTT CGAGAGCGAT CCGGAGATCC GCGTCATCGT GCTGAAGGGC
GCGGGCGGCA AGGCCTTCGT CGCCGGCGCC GACATTTCGC AATTCGGCGA AAGCCGCTCC
ACGGCGGAAG GCATCCTCGC CTACGAAACG GCAACCGAAG TGGCCTTCAA CGCCATCGCC
GATACTGCAA AGCCCACCAT CGCCATGATC GACGGCTACT GCATCGGCGG CGGCCTCGGC
ATCGCGCTCT CTTGCGACAT GCGCATCGCC GCCGAAGGCT CCACCTTCGG CATTCCCGCC
GCAAAGCTTG GCCTCGCCTA TGGCGCCGGC GGCACCGGCC GCCTGGTGCA TGTCGTCGGC
CCCTCCTTCG CCAAGGAAAT CTTCTACACC GCCCGCCGTT TCACGCATGA GGAAGCCCTC
GCCATGGGCC TCGTCAACCG CGTGACGACA AAGGACGCAT TGGAAAATTT CGTCCGGGAT
TACTGCGCCC TCATCGCCGA AAACGCGCCG CTCACCGTCG GCACCGCCAA ACAGGTCGTG
GACGAATTCA CGAAAGCACC CGGCAATTTC GACGCCGCGA AATGCGACGC CCTCATCGCC
CGCTGCTTCG CCAGCGACGA CTACAAGGAA GGCCGCGCCG CCTTCATGGA AAAAAGAAAG
CCGGTGTTCA AGGGCCGGTA G
 
Protein sequence
MSISSPTSKM IAEKTGAIGW MIFNNPERLN AVGLEMWQAV PQILADFESD PEIRVIVLKG 
AGGKAFVAGA DISQFGESRS TAEGILAYET ATEVAFNAIA DTAKPTIAMI DGYCIGGGLG
IALSCDMRIA AEGSTFGIPA AKLGLAYGAG GTGRLVHVVG PSFAKEIFYT ARRFTHEEAL
AMGLVNRVTT KDALENFVRD YCALIAENAP LTVGTAKQVV DEFTKAPGNF DAAKCDALIA
RCFASDDYKE GRAAFMEKRK PVFKGR