Gene Plav_2567 details

Gene Information

• Locus tag: Plav_2567
• ID: 5455016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Parvibaculum lavamentivorans DS-1
• Kingdom: Bacteria
• Replicon accession: NC_009719
• Strand: +
• Start bp: 2767504
• End bp: 2770929
• Gene Length: 3426 bp
• Protein Length: 1141 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640878144
• Product: hypothetical protein
• Protein accession: YP_001413833
• Protein GI: 154253009

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 46
• Fosmid unclonability p-value: 0.265444
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAACCGAA TCCACCCACA TATCGCGCGA CACAGCGGGG TCGGAAGGCC GCGCCATTTT 
CTCATGGGAA TGGCCGCCCT GCTGCTGATG CTCGCTGCCT TCGTTCCCGA CGCGCGGGCG 
GAAGCCATGC GCGTTGCGCT GAGCGAGAAG GATGGCTACG GCCGAATGGT CTTCACCGCG 
CCGGGCGGGG AGCCCAGCGT TCGCGCTTCC ATCAGTTCAG GCGTTCTGGT GATCGCGTTC 
GGCAAGGCGA GCGGGCTCGA TCCGGATCTC TTCCTGCGGA CCATGCCGCG CTATTTCGCA 
ATGGTGCGGC AGGATGGCAA TGAAAGCACC TTGCGGTTCG CTCTTACGAC CGAGTTCCGG 
CTTGATGTCA AAAAGGCCGA GAACGCCGTT TACGTAGACC TGTTGCCGCC GGACTGGGCG 
GGCGAGGCGC CGCCCTTGCC GGCCGATGTG GTCGCGCGTG TCGCGGCTGC GGAAGAGGCG 
AAACAGAAGG CGGAAGAAGC CGCGCGACTA GCGAAGGCGC AGGGCATCGT CGAGCCCGAT 
GCGCCGCCGC CGGGCCTTGC CGTGCGCGTG GTTGCGCGCG ATGGCATGAC GCGGCTCGTC 
TTCGACTGGA ACCAGCCGGT GCTTTACTCG CTGGTGCAGC GGCAGGGGCT CGCAACCATC 
ACATTCGATC GCACGGCAAA GGTCGACCTG TCGTCGCTCC GTGTCGATCC GCCGCCTTAT 
CTCAGCCATG CCAGCGCGAC CGAACATGAC GGACGCCTCG CCGTGATCCT GACGTTGAAG 
CCCGGCGTGA GTATCGCCGA CTTCCGCGAG GATATGGGCG TGGTGCTGGA CCTGAAGCCC 
GCGCAGGGCG GCATCGAGGA TGAAGCGAAA GCCGCAGCCG CGGCATTGAC GGATGAGAAG 
AAGGCGCCCG CGCCGAGGGA CATCAGGCCT GAGACCGCGC GGGGAGCGGA AGAGCCGGCC 
GCCACGGCGG AGGCGCCGGA AGATGTTCCG CCGGCGGAAG AGATGGCGGC GGCGCCGGGG 
AAGACGAATG CGATGCCGCA AGGCGGGCGG CCTGAAGGAA AGGCCGTCGT CCGCATTCAG 
CCGGGGCGCA GCGGCATGGA TGTCATTGTC GCATGGCCGG AGCCTGTCGG CGCGGCGGTC 
TTCGAGCGGG CGGGGCGGCT GTGGGCGGTG TTCGATGCCG CGCTGCCGAT GGATATTTCC 
GGGATCGAGG CGGAAACGTC CGGTCCCTTC GGCGCGCCGG AAGTAGTGCG TTTCGAGGGA 
GGAACGGCGC TGGTGCTGCC GCTCCGCGAG CGGGTGCTTG TGGGCGCCAT CGAGGAAGGC 
GCGTCCTGGC GGATATCGGC GGGCGAGACG CTGACGACGA CGGGGCGGCC GATTGCGACT 
TCGCGGGACT GGCGGGACGA CGGGCGGGGC AGCGTGACAT TCGATTTCGC CGGCGCGCGG 
CGCATTCTGA CGGTGGGCGA CCCGCTGGTG CGCGACACGA TCGTTGTTGC GACGGCGCGC 
GGTCCGGTGC AATCGCTGCA GACGGCGCGC AGCTATGTCG AATTCCAGGC ATTGCAGACG 
GCGCAGGGGA TCGCCATCGT GCCCGTGGCC GACGATGTGA ATGTCGCGGC GGCGCCGGAC 
AATGTGCTCG TGTCGCGGCG TGAGGGGCTG ACACTCTCCG CCGACGATCA CCGGGACGGG 
AGCGGCGATA GCGAAAGCGC GTCCGTTGCG TCGGTGCCGG TGACGTCGCT GATGAATTTC 
GAGGAATGGC GCAAGGCGCC GGGCGAGACG TTCACGGAAC GGCGCCAGCA TTATCTTTCG 
CGTTTCGTGC AGGCGCAGGC GCATGAGCTC GGCAAGCTGC GGTTCGAATA TGGGCGGTTC 
CTGTTGGCCT ATGGGCTCGC ACCGGAAGCA CGCTCCATGC TCGAAAAGGC GGCGGAGGCG 
AATACGCGCT ATGGGATCGA CCCGACTTAC CGCGCGGTGA AGGGCGTGGC GGGCGTGATG 
AGCGGACGCT ATGTGGACGC GATCAACGAT CTCTCCTCCA CCGGCCTCGA GAACGCGCCC 
CATGCGGCGG TCTGGCGCGG GCTCGCGCGG ACGGAGCTCG GGCATTGGGA AGCGGCGCGG 
GCGCAGTTCG GCCTGGCCGG TGCGGTCATA GACGCTTTCG ACGACGATCT GCGGACGCTG 
TTCCGGTCGC GGGCGGCGAA GGCGTCGCTG AGGGGCGGCG ATCTGGCCGC CGCGCAGCAT 
TACGCGGAAG GGTTTCCCGC AGCGCCCCCC GGAAAACAGG CCAAAGCCGA AATCCTGCTC 
GTGAATGCGA TGATCGCGGA TGCGCGAGGC GGGAAGGAAG AGGCGGTCAG GCGCTATGAG 
GCGGCCATCG CAAACGGCTA TCCGCCGGTT GCGGCGCGGG CCCGTTTCGG CAAGGCGGTG 
CTGCTTCACA AGGCGGGCGA GCTCGACGAC GAGGCTTATG CGAAAGAGCT CGAGTCGCTG 
CGTTTCGCGT GGCGCGGCGA CGATCTGGAA CTCGATGTGC TGACGCAACT GGCGGCGCTG 
CGGCTGGAGC AAGGCGAGAT CGCGGATGCG CTGAAGCTCA TGCAGATCGC GACGGCGAAT 
TATCCGGACA GCGACGAAGC GCACCGGATG AACATGCGCA TGTCGGACAT CTTCGCCGAT 
TATTTCCTGA GCGAGAAGGC GAACGAGATG CCGCCGGTGC AGGCGCTCGC CTTTTTCGAT 
GCCTTCAAGG AATTGACGCC CATCGGAAGC AAGGGCGACG AGATGATCCG CCACCTGGCG 
GAACGCCTGG TTGCGGTCGA TCTCCTGCCG CAAGCCGAAC ATCTGCTCGA TTATCAGGTG 
GCAAACCGGC TGCATGGCGG CATCGCCAAG GCGCAGGTCG CGGCACGGCT TGCGGCTATC 
TACCTTCTCG ACCAGAAGGC CGACCGGGCG CTGGCGGCGC TTCGGGCGAC GAAGCAGAAC 
CTGCTGCCGG AGGCCCTGGC GGAGCGGCGG CGTTTGCTCG AAGCGCGCGC CCTGGCGGAC 
CTCAAGCAAT ATGACAATGC GCTCGATCTA CTGGAGGAGA AGACGGACGA TCTCTCCGTG 
CGGCTGCGGG TCGATGTGCT GTGGGACAGC GGCCGCTGGC AGGATGCCGG ACCGGCAATC 
GAGGCCCTTC TCGGCGACGC ATGGAAGACG GAGGAGCCGC TGTCCGATGA GATGCGGCTT 
CTGGTGATGC GTGGCGCCAT TGCCTATTCG CTCGCCGGAG AGGAGGGCGG TCTCTCGCGG 
CTGAGGACGA AATTCGGTGA GGCGATGGCG GCGAGCCCGG ATGCGAGCGC CTTTGCGATC 
GTGTCGGATC CGATCGTGCA GCAAGGCGTC GCCTTCCGCG AGATGGCAAG CCGCATCGCA 
TCGATCGATA CGCTCGACCG GTTTCTCGCT TCGCTGAAAA CGGACGACGC GACGGTGCTG 
AACTAG 

 

Protein sequence

MNRIHPHIAR HSGVGRPRHF LMGMAALLLM LAAFVPDARA EAMRVALSEK DGYGRMVFTA 
PGGEPSVRAS ISSGVLVIAF GKASGLDPDL FLRTMPRYFA MVRQDGNEST LRFALTTEFR 
LDVKKAENAV YVDLLPPDWA GEAPPLPADV VARVAAAEEA KQKAEEAARL AKAQGIVEPD 
APPPGLAVRV VARDGMTRLV FDWNQPVLYS LVQRQGLATI TFDRTAKVDL SSLRVDPPPY 
LSHASATEHD GRLAVILTLK PGVSIADFRE DMGVVLDLKP AQGGIEDEAK AAAAALTDEK 
KAPAPRDIRP ETARGAEEPA ATAEAPEDVP PAEEMAAAPG KTNAMPQGGR PEGKAVVRIQ 
PGRSGMDVIV AWPEPVGAAV FERAGRLWAV FDAALPMDIS GIEAETSGPF GAPEVVRFEG 
GTALVLPLRE RVLVGAIEEG ASWRISAGET LTTTGRPIAT SRDWRDDGRG SVTFDFAGAR 
RILTVGDPLV RDTIVVATAR GPVQSLQTAR SYVEFQALQT AQGIAIVPVA DDVNVAAAPD 
NVLVSRREGL TLSADDHRDG SGDSESASVA SVPVTSLMNF EEWRKAPGET FTERRQHYLS 
RFVQAQAHEL GKLRFEYGRF LLAYGLAPEA RSMLEKAAEA NTRYGIDPTY RAVKGVAGVM 
SGRYVDAIND LSSTGLENAP HAAVWRGLAR TELGHWEAAR AQFGLAGAVI DAFDDDLRTL 
FRSRAAKASL RGGDLAAAQH YAEGFPAAPP GKQAKAEILL VNAMIADARG GKEEAVRRYE 
AAIANGYPPV AARARFGKAV LLHKAGELDD EAYAKELESL RFAWRGDDLE LDVLTQLAAL 
RLEQGEIADA LKLMQIATAN YPDSDEAHRM NMRMSDIFAD YFLSEKANEM PPVQALAFFD 
AFKELTPIGS KGDEMIRHLA ERLVAVDLLP QAEHLLDYQV ANRLHGGIAK AQVAARLAAI 
YLLDQKADRA LAALRATKQN LLPEALAERR RLLEARALAD LKQYDNALDL LEEKTDDLSV 
RLRVDVLWDS GRWQDAGPAI EALLGDAWKT EEPLSDEMRL LVMRGAIAYS LAGEEGGLSR 
LRTKFGEAMA ASPDASAFAI VSDPIVQQGV AFREMASRIA SIDTLDRFLA SLKTDDATVL 
N