Gene Plav_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2550 
Symbol 
ID5456153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2752340 
End bp2752732 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content57% 
IMG OID640878127 
Productflagellar FlbT family protein 
Protein accessionYP_001413816 
Protein GI154252992 
COG category[N] Cell motility 
COG ID[COG5443] Flagellar biosynthesis regulator FlbT 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.998924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCA AAGTCGAACT CAAGCCCGGT GAGCGTTTCA TCCTGGGCGA CAGCGTCATC 
ACAAACGACG ACCAGCGCAC CCGCCTGTTC ATCGAGGGCG AGACGCCGAT CCTCCGCGAA
AAGGACATCC TCCGCGCGGC GGACGCCGAT ACGCCCTGCA AGCGTCTCTA TCTCCTGGTT
CAGATGATGT ATCTGGCGCC CGATCCCCGC CCCCACCACG ATCTCTACTT CCAGATCGTC
AAGGACGTGA TCGACGCAGC CCCCTCGACT GCGCCATTTA TAGACGCGGT GAACAGTAAA
ATCTTAACCG GCGAAATGTA TAAAGCTCTC AAGGAAGCTC GTAAGTTGAT CGAGTACGAA
CGGGGGCTAC TGGAGAATGT CAAGACCTCA TGA
 
Protein sequence
MALKVELKPG ERFILGDSVI TNDDQRTRLF IEGETPILRE KDILRAADAD TPCKRLYLLV 
QMMYLAPDPR PHHDLYFQIV KDVIDAAPST APFIDAVNSK ILTGEMYKAL KEARKLIEYE
RGLLENVKTS