| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2542 |
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| Symbol | |
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| ID | 5455515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2743762 |
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| End bp | 2745126 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878119 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413808 |
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| Protein GI | 154252984 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.369818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.298513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCT TTGGATCGAT GACCACCGCC ATCACGGGTA TTCGCGCCCA GTCGAGCGCG
CTCGGTCACA TCTCGGACAA TATCGCCAAT TCGCAGACCA TCGGCTTCAA GCGGACGGAC
ACGAATTTCC AGGACATCGT GACGGCTTCG ACGAGCCGCA ACCACCTTCC GGGCGCGGTG
CTGGCAGCGC CTTCCTTCAC CAATAATGTG CAGGGCTCGA TCGACGCTTC CGAAGTGCCG
ACGCATATGG CGATCAACGG TTCGGGCTTC TTTGTCGTGT CGGCGCGGGT GGCGACGGTC
GACGGCAACC CGGTCTTCGA CAATGTGAAC TACTACACGC GGCGCGGCGA CTTCTCGATG
GACAAGTATG GCTACCTCGT GAATGGCGGC GGCTACACGC TGCAGGGGCT GGCCATCGAT
CCGGTGACGG GCAATCCGGT AGGCGACACG CCGAGCCGCA TCCAGATCAA CCGCGATTTC
CTGGCGGCGC GCACGACCTC GACCATCAGC TACAAGGCGA ACCTGCCGGC CTGGCCGAAG
ACGGTGAACG CCGATCCGGC GATCGCCAAC AGCGAGCTTC TGACGGTGGG CCGCTTCACG
CCGGCGCTGG CCGATCTCAG CGTCATCTCG GCGGCGAATG AAGACATCTT CCTCGACAAC
TCGCTCTCGG GCGGCGCGGT GACGGGCTAT GACGAGCTTG GCGCACCGGC GAACGTCCAG
TTCCGCTGGG CGAAGATCGA CAATGAGGAT GGCGGCGGCG ACACCTGGAA CCTGTTCTAC
AAGACCAGCG ACAGCGCGAC CGGCGCGACC GACAAATGGG TGAATGTGGG GCAGGACTAT
GCCTTTGACG GGCAGGGCCG GCTGACACCC GCCGTGGACT CGACGACGAT TACCGGCCTG
ACGGTGAACG GCGTCAGCCT CGGCAATGTG ACGCTCGATC ATGGCGCGTC GAACGTGACG
CAGTTCGAGG ACGATAACGG CACGGTGAAG ACGACCGAGC TCGACCAGAA CGGCTATCCC
TCCGGCGAGC TTGTGAGCAT CGCGGTGTCG GAGAACGGGC GCATTACCGG CACCTATTCC
AACGGCAAGA CGGTGGACCT CGCGCAGGTT TCGCTGGCGA CGTTCAATGC TTCCGACAAG
CTGAAGAAGC TCGACGGCAC GGCCTTTGCG GCGACGCAGG AATCCGGCGA GCCGATGCTT
GGCGGCGGCG GCGACATCAT CGCCTCGGCG CGGGAAGCAT CCAACGTCGA TATCGCCGAC
GAGTTTTCCA AGCTGATCGT GACGCAGCAG GCCTATACGG CCGGTACGCG CATCGTGACG
ACGGCGGACG AACTTATCCG CGAAACGCTG AACATGAAGC GCTGA
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| Protein sequence | MSFFGSMTTA ITGIRAQSSA LGHISDNIAN SQTIGFKRTD TNFQDIVTAS TSRNHLPGAV
LAAPSFTNNV QGSIDASEVP THMAINGSGF FVVSARVATV DGNPVFDNVN YYTRRGDFSM
DKYGYLVNGG GYTLQGLAID PVTGNPVGDT PSRIQINRDF LAARTTSTIS YKANLPAWPK
TVNADPAIAN SELLTVGRFT PALADLSVIS AANEDIFLDN SLSGGAVTGY DELGAPANVQ
FRWAKIDNED GGGDTWNLFY KTSDSATGAT DKWVNVGQDY AFDGQGRLTP AVDSTTITGL
TVNGVSLGNV TLDHGASNVT QFEDDNGTVK TTELDQNGYP SGELVSIAVS ENGRITGTYS
NGKTVDLAQV SLATFNASDK LKKLDGTAFA ATQESGEPML GGGGDIIASA REASNVDIAD
EFSKLIVTQQ AYTAGTRIVT TADELIRETL NMKR
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