| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2510 |
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| Symbol | |
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| ID | 5455790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2709799 |
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| End bp | 2712060 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878087 |
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| Product | putative Chase2 sensor protein |
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| Protein accession | YP_001413776 |
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| Protein GI | 154252952 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.0278578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCTA CACCGGCGTT CCGCAGACTT TCCGCCATCC TGCCCGGCCT TGTGCTGGTG
CTGAGCGTAT TCGTGGCGAT CAACGATCCG CACGGTGCGG GCACATTCCT GCAGAACCGG
GCCTTCGACC TCTATCAGCG CATCCTGCCG CGCGAAGCGG GCGCGGGCGG ACCTCACGCC
GTTTATGTCG ATATCGACAC CGAGACCGCG AAACGCTTCG GCGCCTGGCC CTGGCCGCGC
AAGCGCCTCG ACATGCTGGT CGAAAAAGTG CGCGACGCGG GCGCGAGCGC CATCGTGATC
GACATGACAC TGGCGGACGC CGACCCGACC GCGACGAGCG AATTGCTGCG GCTCTGGTCT
CCTTTCCCCG CCGGAGAGAA GTTCAACGGC TTCAGCCGCA CGCTGAGCGG CCTGCCGAAC
CACGAACGCG AACTGGCGGC GCTCCTTTCC TCGTCGAAAT CGGTCGTTTC CTTCGTTCCG
GGCAAGACAT CCTTCGACGG CCAGCACACG CCTGCCCGCC CCGCCAGCAT TACGCCCAGC
GGCGGCGACC CGCGCCATTA CATGCGGGAC TACGAGACCT GGCGACCGAG CCTGCCGCTC
TTCGAGGCGG CGGCGACCGG CAATGGCGCG AGCCTGCCCG AGCGGGATCA TGGCGAGACG
ATACGCGGAC TGCCGATGCT GACCGCGCTC GACGGCACGC TCTATCCATC GAACGTGCTC
GAAGCCTTAC GCGTCGCCAG AGGCGGCGCC GGCTATCGCG CGGTCGTGCG CGCACCGGAG
AGCGGCTTTT CCTTTGAAAT CGAACCGGGC CTGGAGCGCG TGGAAATCAC GGGCACGGGG
CTCCATGCGC TTACACAGAA AAATGGCGAG CTGCGGCTCT ATTTCGGCGG CGAAGCGACG
CGCCGCTCGA TCCCGGCCGG CAGCATCCTG TCCGGCGGCG CCAATCTCGG CGCGCTGGCG
GGCCGCATCG CCATCATCGG CGTCTCGGCC AATGGCAGCC TGCAATTGCA CGACACGCCG
CTCGGCATTC CGCTTGCCTC CGGCGCCATT GCCGCCAATG CCATCGACCA GATTGCCGAT
GGCGCCTTTC TCGTAAGACC GGGCTGGGCC GGCGTGGCGG AACAGGTGTT CGTGCTGCTG
GGCGGGCTGA TCGTCATTCT GGTGGTGCGG CGCTTCCGCT TCCGCTGGGG CTTTGCGCTG
ACGCTGCTGC TGATCGGCGG CGCGGCCTAT GGCTCCTGGT GGGCATTCGA GACGCATCGC
TGGCTGATCG ACCCGACGCT GGGCGGCGTG ACGCTCGTGC TGGCGGCGCT GACCTGCGCC
CTGATGACAC GGCTCCACAC CGAGGACGAA ATCCGCTTTG TCGAAACGCA GTTCGGCCGC
CGCCTCTCCT CCTCCGGCCT TGCGCGCGTG AAGGCGAACC CGCACATGAT CCGCGCCGAG
GGCGCGCTGC GCGACGTGAC CTCCGTCGTC GTCGGCCTGC GCGGCTTCAA CATCATCGCC
GACCGCTACC TGGAAGACCC GACCGCCTAT GCCGACATCC TGAACCGCTT CTTCTCGCCG
ATGACCAAGA TCGTGCAGGA CCGGAACGGC ATGGTGGACC GCGCCGTGGG CGACACACTT
TATGCCGTGT GGAACGCCCC GCTGGATGTG GCCGATCATG CCTCGAAAGG CTGCGATGCG
GCGCTCCGGA TGGTCGAAAA CCTGGAAGCT CTCAACGAGT TCCTTGAAGA GGACGCGCGC
CGCCAGCACC TGAGCCATGT GCCGCTGAGC CTCTCCGTCG GCATCGACAC AGGGACCGCG
ATCACCGGCA ACATGGGCGC CGTGCAACGC TTCGACTATG GCGTGCTGGG CGAGCCGGTG
AGCTTTGCGG CCTATCTGCA GAAGAACGCC CGGCACTACG GCCCCGCCAT CATCGTCGGC
GAAGGCACGC AGCGCGCCGT GGGCGGCCGC TATGCGCTGC TCGAAATTGA CCTCGTATCG
ACCTCGCGCC ACCCGGAAGG CCGCCGCATC TTCGCCCTGC TTGGCGACCC GATCATGCGG
GCCAACCCGA AGTTCCGCGC GCTTCAGGAA GCCCATGCCC TGATCTTCTC GGCCTATCGC
AGCCAACGCT GGGCGGAAGC ACGGGCGGCC ATCGCCGAAT GCCGCAAGCT CAACGGCGCC
ATTCCGACGC TCTACGACTT CTACGAGACG AGGATCGCGC AATACGAGGC GAATCCGCCC
GGCGACCACT GGAACGGGGC CTTCTTCGCC GGCCGCATCT AG
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| Protein sequence | MNPTPAFRRL SAILPGLVLV LSVFVAINDP HGAGTFLQNR AFDLYQRILP REAGAGGPHA
VYVDIDTETA KRFGAWPWPR KRLDMLVEKV RDAGASAIVI DMTLADADPT ATSELLRLWS
PFPAGEKFNG FSRTLSGLPN HERELAALLS SSKSVVSFVP GKTSFDGQHT PARPASITPS
GGDPRHYMRD YETWRPSLPL FEAAATGNGA SLPERDHGET IRGLPMLTAL DGTLYPSNVL
EALRVARGGA GYRAVVRAPE SGFSFEIEPG LERVEITGTG LHALTQKNGE LRLYFGGEAT
RRSIPAGSIL SGGANLGALA GRIAIIGVSA NGSLQLHDTP LGIPLASGAI AANAIDQIAD
GAFLVRPGWA GVAEQVFVLL GGLIVILVVR RFRFRWGFAL TLLLIGGAAY GSWWAFETHR
WLIDPTLGGV TLVLAALTCA LMTRLHTEDE IRFVETQFGR RLSSSGLARV KANPHMIRAE
GALRDVTSVV VGLRGFNIIA DRYLEDPTAY ADILNRFFSP MTKIVQDRNG MVDRAVGDTL
YAVWNAPLDV ADHASKGCDA ALRMVENLEA LNEFLEEDAR RQHLSHVPLS LSVGIDTGTA
ITGNMGAVQR FDYGVLGEPV SFAAYLQKNA RHYGPAIIVG EGTQRAVGGR YALLEIDLVS
TSRHPEGRRI FALLGDPIMR ANPKFRALQE AHALIFSAYR SQRWAEARAA IAECRKLNGA
IPTLYDFYET RIAQYEANPP GDHWNGAFFA GRI
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