Gene Plav_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2484 
Symbol 
ID5453548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2686227 
End bp2687075 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID640878061 
Producthypothetical protein 
Protein accessionYP_001413750 
Protein GI154252926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.235294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.1363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCC GCCCTCTTCT ACTTCTTCTG TTTCTGGCTG GCCTGACCGC GACGGCCTGT 
ACCACGCTGC CCGACCCGGG CGAGCGCAAG GCCCGCGCGG ACAAGTTGGC GGCGGCACAA
GGCATGGAGC CGTCAACGAT CCCCGCCGGT GATTTCGACC TCTACAGCCT TATCCGCGCC
GACCGGCCTT CCGGCCTGCT CATCGTCTAT CTGGAAGGAG ACGGCCTCGC ATGGACGAGG
CGGAACGAGC CTTCGCCGGA CCCGACCCCT GTCTCACCCG TCGCGCTGCA GCTAGCCGTA
AAAGACAATG GACCAGCCGT CGCCTACCTC GCCCGGCCGT GCCAATACAC ACAAGGCCAG
GCACGGCGAA ATTGCGGCAA TGAGACCTGG ACCAACGCTC GCTACAGCGA AGCGGTGGTG
CAGTCCGTCG ACGCGGCTCT GGACAAGCTG AAGGAGCGAA CAGGCGCCGC ACAGCTCGGT
CTTGTCGGCT ACTCCGGCGG CGGCACTGTC GCGGCACTAT TGGCAGCACG ACGCCATGAC
GTGGCGTGGC TCAAGACCGT CGCCTCGCCT CTCGACACGG CAGCATTCAC CAGACATCAC
CAGGTCAGCG GGCTGAGCGG CTCGCTCAAT CCGGCGGATG ACGCCATCCG CCTCGCGGCC
ATCCCGCAAA TACACTATGT GGGCGAAGAG GATGACATCG TTCCCGAAGC GATCAATCGT
GCCTTCATGG CCCGTCTGGC CGACCGGCGC TGCGCAACGC TGCATGTCAT GCCGGGCCTC
GGCCATCGCG ATGGCTGGGA CGAGGCGTGG CAGGGGGTCC ACTCCACGCG TCCCGCTTGC
CGAAAATAG
 
Protein sequence
MTLRPLLLLL FLAGLTATAC TTLPDPGERK ARADKLAAAQ GMEPSTIPAG DFDLYSLIRA 
DRPSGLLIVY LEGDGLAWTR RNEPSPDPTP VSPVALQLAV KDNGPAVAYL ARPCQYTQGQ
ARRNCGNETW TNARYSEAVV QSVDAALDKL KERTGAAQLG LVGYSGGGTV AALLAARRHD
VAWLKTVASP LDTAAFTRHH QVSGLSGSLN PADDAIRLAA IPQIHYVGEE DDIVPEAINR
AFMARLADRR CATLHVMPGL GHRDGWDEAW QGVHSTRPAC RK