Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2434 |
Symbol | |
ID | 5453655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2632296 |
End bp | 2634110 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640878010 |
Product | peptidase M24 |
Protein accession | YP_001413700 |
Protein GI | 154252876 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.411421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.660909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAGA CTTTTGAAGA CAAGGCCAAT CCGGCCCTCG GGATCGAACG TGCGGCGAAG CTTCGCGAGG AGCTGAAGCG GCGCGGGCTC GACGGTTTCC TCATTCCCCG CGCCGACGAG CATCAGGGCG AATATGTGCC GCCCCATGCG GAGCGGCTTC TCTGGCTGAC CGGCTTCAAC GGCTCGGCGG GCATGGCGAT CGTGCTGAAG GACCGTGCCG CGATCTTTGT CGACGGGCGC TACACGCTGC AGGTGCGCGG CCAGGTGGAC ATGGACACTT TCGAGCCGAA GCACCTGATG GATGAACCGC CGGCGCGCTG GATCGAGGAA AACCTGCCGA AGGGCGCAAA GCTCGCCTAC GACCCGTGGC TGCACACGAT CGACGCGGCG GCGCGCTACA AGAAGGCGGC GGAGAAGGCG GGCGGCGAAC TGGTGGCGGT GGACACGAAC CCGCTCGACG CCGTCTGGGC CGACCAGCCG GAACCGCCTG TGGCGAAAGT CGTGCCCCAC CCGCTCGACG TCGCGGGCGA GGCGGCGAGC GACAAGATCA AACGCATCGC GACGGCGCTG ATGAGCGAGG ACGCGGACGC CGTGGTGCTG ACCATGCCGG ATTCGATTGC ATGGCTCTTC AATATCCGCG GTGCGGACGT GCCGCATACG CCACTGCCGC TCTCCTTCGC GCTGCTGCAT GAGGACGGCC ATGCCGACCT CTTCATCGAC GAGCGCAAGC TCGATGGCGA GGCGCGCGCG CATCTCTCCG GCATCGCGAC GCTGTACGGA CGGGACGACC TCGGCGCGGC GCTCGATGCG CTAGGCCGCG CGAAGAAGAC CGTGCTGGTG GACCCAGCAA CCTGCGCCGC ATGGATCGAC GCGCGGCTGA AGGCGGCGGG CGCCGAGGTG AAGCGCGGGA ACGATCCGTG CGAACTGCCG AAAGCCTGCA AGAACGAAGC GGAAGTGAAC GGCACCCGCG CCGCGCATCT GCGCGACGGA CGCGCGCTGA CGAAGTTTCT CGCATGGCTC GGGCGCGAGG CGCCGAAGGG TGGCGTCGAC GAGATCGCGG CGGCGAAGAA GCTCGAAGCC TTCCGCGCGG AAACGAACGA ACTCCGCGAC CTGAGCTTCG ACACGATTTC GGGCGCGGGC GCGAACGGCG CCATCGTCCA TTACCGCGTG ACGGAGGCGA CCAACCGGCC GCTGAAACCG GGCGAATTGT TCCTTGTCGA TTCCGGCGCG CAATACCGGG ACGGCACCAC CGACGTGACG CGCACGGTCG CCATCGGCAC GGCGGGCGCG GAGGAGCGCG ACCGCTTCAC CCGCGTGCTG AAAGGCCATA TCGGCATCGC CACCGCGCGC TTCCCCGAAG GCACCTCGGG CGCGCAGCTC GACGCCTTCG CGCGCATGGC GCTCTGGAAG TCCGGCCTCG ACTACGACCA CGGCACGGGC CATGGCGTCG GCTCCTATCT CTCGGTGCAT GAGGGGCCGC AGCGTATTTC CAAGATGGGC CACCAGCCGC TGAAGGCGGG CATGATCGTT TCCAACGAAC CCGGCTATTA CAAACCTGGC GGCTATGGCA TCCGCATCGA GAACCTCTGC GTCGTGACAC CCCCCGCCCC GATTGAAGGC GGCGAGCGCA TGATGATGGG CTTCGAAACG CTGACGCTCG CGCCGATCGA TCTTGCGCTG GTGGAGAAAA GCCTGCTGAC GGCAGAGGAA GTGGACTGGC TCAACGCCTA TCACGCCCGC GTCCGCGAGG TGCTGTCGCC GGGGCTCGAC GCGGAGACGA AGGCGTGGCT GGAGACGGCG ACGCGGGCGA TTTAA
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Protein sequence | MFQTFEDKAN PALGIERAAK LREELKRRGL DGFLIPRADE HQGEYVPPHA ERLLWLTGFN GSAGMAIVLK DRAAIFVDGR YTLQVRGQVD MDTFEPKHLM DEPPARWIEE NLPKGAKLAY DPWLHTIDAA ARYKKAAEKA GGELVAVDTN PLDAVWADQP EPPVAKVVPH PLDVAGEAAS DKIKRIATAL MSEDADAVVL TMPDSIAWLF NIRGADVPHT PLPLSFALLH EDGHADLFID ERKLDGEARA HLSGIATLYG RDDLGAALDA LGRAKKTVLV DPATCAAWID ARLKAAGAEV KRGNDPCELP KACKNEAEVN GTRAAHLRDG RALTKFLAWL GREAPKGGVD EIAAAKKLEA FRAETNELRD LSFDTISGAG ANGAIVHYRV TEATNRPLKP GELFLVDSGA QYRDGTTDVT RTVAIGTAGA EERDRFTRVL KGHIGIATAR FPEGTSGAQL DAFARMALWK SGLDYDHGTG HGVGSYLSVH EGPQRISKMG HQPLKAGMIV SNEPGYYKPG GYGIRIENLC VVTPPAPIEG GERMMMGFET LTLAPIDLAL VEKSLLTAEE VDWLNAYHAR VREVLSPGLD AETKAWLETA TRAI
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