| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2407 |
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| Symbol | |
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| ID | 5454025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2595518 |
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| End bp | 2599135 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877982 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001413673 |
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| Protein GI | 154252849 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.743772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAG AGCATACGCC CTCCGCGCGC TGGGACTTCT GGATCGATCG CGGGGGAACA
TTTACCGATA TTATCGGCCG GGCGCCGGAT GGCGGCCTGC ATGCGCTGAA GCTCCTGTCC
GAAAATCCCG AGAATTATGA AGACGCGGCC CTGCAGGGCA TTCGCGATCT TCTCGCCGTT
CCCGGAAACG AACCCCTGCC CGCAGGCCGC ATCGGCGCGG TGAAGATGGG GACGACGGTG
GCGACGAATG CGCTGCTTGA GCGCAAGGGC GACCGCGCGC TGTTTCTCAC CACGCGCGGC
TTTCGCGATG CGCTTGCCAT CGGCTATCAG GCGCGGCCCC ACCTCTTCCG CCTGAAGATC
GAAAAACCCG AACTGCTTTA TGAGCGCGTT GCGGAGGTGA ACGAGCGCGT GACGGCGGAA
GGGGAAGTGC TCGCACCTCT CGACGCCGGG GAAACCCGGG AGGCATTGCA AAGAGCCTTC
GACCAAGGCA TCCGCTCCGT CGCCATCTGC TTCATGCATG GCTATCGCCA TCACACGCAT
GAAGCGGAAG CCGAACGCCT GGCCCGCGAC ATCGGCTTCA CGCAAATCTC GACGAGCCAC
AACACAAGCC CGCTCATCAA ATTCGTCTCG CGCGGCGACA CGACCGTTGT CGATGCCTAT
CTCTCCCCTC TTCTCCGCCG CTATGTCGAC CGGATTGCCG CCGAAATCGA CATGGAGGAA
AGCGGCACGA GGCTCTTCTT CATGCAGTCT TCCGGCGGCC TGACCGATGC GGGCCTCTTT
CAGGGGAAGG ATGCCATTCT CTCCGGCCCG GCCGGCGGCG TGGTCGGCGC GGCCATGACG
GCGGCACGCG CGGGCTTCGC GAGGGTCATC GGCTTCGACA TGGGCGGAAC CTCCACCGAC
GTCTCGCACT ACAATGGCGA CTATGAGCGA AGCTTCGAGA CGCAGGTCGC GGGCATACGC
ATGCGCGTGC CCATGCTTCG CATCCATACC GTTGCCGCGG GCGGCGGCTC TATCCTGCGC
TATGAAGACG GACGCTTTCA GGTGGGTCCG CAATCCGCGG GCGCAACGCC CGGTCCCGCC
TCATACCGGC GCGGCGGGCC GCTTGCCGTG ACCGACGCGA ATGTGATGCT GGGGAAGCTG
CAGCCGGACC TCTTCCCGGC CGTTTTCGGC CCGGAGCAGA ACCAGACGCT CGACGCGGAG
ACGGTGCGCC GGCAATTCGC CGAACTCGCG GCGCGGATCG GCGGCGGCAG GACGCCGGAA
GACGTAGCCG ATGGCTTCCT GCGCATTGCC GTCGAGAACA TGGCCAACGC GATCAAGAAA
ATCTCCGTCG AGCGCGGCCA TGATGTGACC TCCTATGTGC TTGCGAGCTT CGGCGGCGCG
GGCGGCCAGC ATGCCTGCCT GGTGGCCGAC GCGCTCGGCA TGACGACCGT GCATGTTCAT
CCCTTGTCCG GCCTGCTTTC CGCTTATGGC ATCGGCCAGG CGAGGATCAC TGCCTCGCAT
GTGCGCGCCG TGCTGAGCCC CTTGAACGAG AAGCTGCTGC CTGCACTTGA CGATGCCCTC
GCCAGCCTGA CGGCGGCCGC GAAGCGTGAG ATCGAAAGCC AGGGCGTGGA CGGGGCCGCG
ATCAACACGA GGCCCCTTCT CCACCTTCGC TACGAAGGCA GCGACACCAT CCTGCAGATC
GATTTTTCCG CGCGGGACCG GCAGGCGGCA GCGGAAGCCT TCAGGCAGGC GCATGAGGCT
CAATTCGGCT TCAGCTTCGA GGGAAAAGGC ATCGTGGTGG AGGCTGTGGA GGTGACCGCG
GAGGAGAACG CGGTGCCCGA TGGCGCCGCC ACGAAACGCG CATCCGCAAG CGGCACGCCC
GAGGCATTCG ACAGGCGCCG GATCTACATG GCCCATGCGT GGCGGGAGGC CGAAATCTTC
CTTCGCGAGA CACTGCAGCC GGGCCACGGG CTGACGGGGC CGGCGCTCAT CGTCGAGCCG
AACCAGACGA TCGTCGTCGA GCCCGGCTGG CGCGCCGAGA TTACGCCCGA TGATGACGTG
GTGATGCGGC GGACGGAGCC GCTGCCGCCG CGCGTGGCGA TCGGCACGGG GGCGGACCCT
GTGATGCTGG AGATTTTCAA CAACCGCTTC ATGTCCATTG CCGAACAGAT GGGCGCAACG
CTTCAGAACA CGGCCTCCTC CGTCAACATC AAAGAACGGC TCGATTTTTC CTGCGCCGTC
TTCGACCGCG AGGGCGGGCT TGTTTCAAAC GCGCCGCATA TGCCGGTTCA CCTCGGCTCG
ATGGGCGCCA GCGTGCGCGC GGTGATCGAC CAGAACACCG GGATGGGACC TGGCGACGTC
TTCGTGCTGA ACGCGCCTTA TAATGGCGGC ACCCACCTGC CCGATGTGAC GGTGGTCGCG
CCTGTCTATG ACGAAGCCCG GCGGGAGCGG CTTTTCTATG TTGCCGCGCG CGGCCACCAC
GCCGATATCG GCGGCATATC GCCCGGATCG ATGCCCGCGC ATTCAAGGAC CGTCGAAGAA
GAAGGCGTGC TGATCGACAA TTTCCGCATC GTGACGGGCG GCATTTTTCA CGAGACGGAA
ATGAGGTCGC TGCTGGCAGG CGGGAAATAC CCCGCGCGCA ATCCCGATCA GAACATCGCG
GACCTGCGCG CCCAGATTGC CGCCTGCGAG AAAGGCAGCC GGGAACTGCG CCGCATGGTG
GCCGAATTCG GCCTGCCTGT CGTCGAGGCC TATATGGGCC ATGTGCAGGA CAATGCGGAG
GAAAATGTCC GCCGCGTAAT CGACCGGCTG AAGGATGCGC ATTTCGAGCA GCGCATGGAT
GATGGTTCGG TGATCTGCGT GCGCGTGACC GTGGACAAGG AGCAGCGCAG CGCAAGGATA
GATTTCAGCG GCACGAGCGG CGAGCTCGCC AGCAACCTGA ATGCGCCATC GGCCGTTGCG
CGCGCGGCGG TGCTCTATGT TTTCCGCTGC ATGGTGGACG AGGACATTCC GCTGAATGAA
GGCTGCCTGA AGCCAATCGA AATAGTCATT CCCGAAGGCT CGATGCTGAG CCCGCGCTAT
CCCGCGGCCG TTGTCGGCGG CAATGTGGAG ACGAGCCAGG CGGTGACGGA CGCGCTTTTC
GGCGCCTTCG GCGCGATGGC ATCGGCGCAA GGCACGATGA ACAACCTCAC CTTCGGCAAT
GACAGGCATC AATATTATGA AACGATTGCC GGCGGTGCGG GCGCCGGCCC CGATTTCGAC
GGCGCGGATG CCGTGCAGAC GCATATGACG AATTCGCGGC TGACCGACCC CGAAATACTC
GAATGGCGCT TTCCCGTGTT GCTGGAGGAT TTCAGCATTC GCAAGGGCTC GGGCGGCGGC
GGCAAACACA AAGGCGGCGA CGGCGTCATC CGCACCATCC GCTTCCGCGA ACCGATGAGC
CTTTCCATCC TCTCGACGCA TCGCATCGTC GCGCCGTTCG GCCTCGCGGG CGGAAAGGAC
GCGGCGCCCG GCGAGAATGA ACTGCGCCGC AGCGACGGCC GAACCGAGTT ACTCGATGGT
TCGGCGCAGG CCGAACTGGC GGCGGGAGAT GCCGTCATTG TGAAGACGCC CGGCGGCGGC
GGCTACGGCA AGGCCTGA
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| Protein sequence | MTTEHTPSAR WDFWIDRGGT FTDIIGRAPD GGLHALKLLS ENPENYEDAA LQGIRDLLAV
PGNEPLPAGR IGAVKMGTTV ATNALLERKG DRALFLTTRG FRDALAIGYQ ARPHLFRLKI
EKPELLYERV AEVNERVTAE GEVLAPLDAG ETREALQRAF DQGIRSVAIC FMHGYRHHTH
EAEAERLARD IGFTQISTSH NTSPLIKFVS RGDTTVVDAY LSPLLRRYVD RIAAEIDMEE
SGTRLFFMQS SGGLTDAGLF QGKDAILSGP AGGVVGAAMT AARAGFARVI GFDMGGTSTD
VSHYNGDYER SFETQVAGIR MRVPMLRIHT VAAGGGSILR YEDGRFQVGP QSAGATPGPA
SYRRGGPLAV TDANVMLGKL QPDLFPAVFG PEQNQTLDAE TVRRQFAELA ARIGGGRTPE
DVADGFLRIA VENMANAIKK ISVERGHDVT SYVLASFGGA GGQHACLVAD ALGMTTVHVH
PLSGLLSAYG IGQARITASH VRAVLSPLNE KLLPALDDAL ASLTAAAKRE IESQGVDGAA
INTRPLLHLR YEGSDTILQI DFSARDRQAA AEAFRQAHEA QFGFSFEGKG IVVEAVEVTA
EENAVPDGAA TKRASASGTP EAFDRRRIYM AHAWREAEIF LRETLQPGHG LTGPALIVEP
NQTIVVEPGW RAEITPDDDV VMRRTEPLPP RVAIGTGADP VMLEIFNNRF MSIAEQMGAT
LQNTASSVNI KERLDFSCAV FDREGGLVSN APHMPVHLGS MGASVRAVID QNTGMGPGDV
FVLNAPYNGG THLPDVTVVA PVYDEARRER LFYVAARGHH ADIGGISPGS MPAHSRTVEE
EGVLIDNFRI VTGGIFHETE MRSLLAGGKY PARNPDQNIA DLRAQIAACE KGSRELRRMV
AEFGLPVVEA YMGHVQDNAE ENVRRVIDRL KDAHFEQRMD DGSVICVRVT VDKEQRSARI
DFSGTSGELA SNLNAPSAVA RAAVLYVFRC MVDEDIPLNE GCLKPIEIVI PEGSMLSPRY
PAAVVGGNVE TSQAVTDALF GAFGAMASAQ GTMNNLTFGN DRHQYYETIA GGAGAGPDFD
GADAVQTHMT NSRLTDPEIL EWRFPVLLED FSIRKGSGGG GKHKGGDGVI RTIRFREPMS
LSILSTHRIV APFGLAGGKD AAPGENELRR SDGRTELLDG SAQAELAAGD AVIVKTPGGG
GYGKA
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