| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2402 |
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| Symbol | |
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| ID | 5456115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2589288 |
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| End bp | 2590349 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877977 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_001413668 |
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| Protein GI | 154252844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.264872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.0639264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAG AAGAACGAAT TGAAAAGCTG AAAGCCCTGT CCAAGGAGCG GATTCTGGTG
CTTGACGGCG CAATGGGCAC GATGATCCAG GGCTACAAGC TCACCGAGGC CGATTATCGC
GGCGAGCTGC TGAAGGATCA TGCGAGCGAC GTGAAGGGCG ACAATGAGCT GATCTCGTTG
GCGCAGCCCG ACATCCTGCG CGAAATCCAT CTGAAATATT ATCGCGCCGG TGCCGATTTC
GCCGAGACCA ATACGTTCGG CGCAACCTCC ATCGCGCAGG CCGATTATCA CCTCGAACAT
CTCGCCTATC AGATGAATGT CGAAAGTGCC CGCATTGCCC GCGAGGCGGC CGACATCGCG
GAGAGCGAAA CGCCGGGGCG TGTCTGCTTC GTTGCAGGCG TTCTCGGGCC GACCAATCGT
ACGGCTTCCA TCTCGCCGAA GGTGAACGAT CCCGGTTTTC GCAATGTCAA CTTCGACCAG
CTGGTCGAAT CCTACAAGGA AGCGACGAAG GGGCTCATCG AAGGCGGCGC CGATACCATT
CTGGTGGAGA CGATCTTCGA CACTCTGAAT GCGAAGGCGG CCTTGTTCGC CATCGAAGAA
GTGTTCGACG AACTGGGCTT CGAGCTGCCG ATCATGATTT CGGGAACCAT CACCGATATG
TCGGGCCGTC TGCTTTCAGG CCAGACGCCG GAAGCCTTCT GGAATTCCGT GCGCCATGTG
AAGCCTTTTT CGATCGGTCT CAATTGCGCG CTGGGTGCCA AGGAAATGCG GCCCCATGTT
GCAACCCTCT CCCGCATCGC GGATGCGGGT GTCAGCGCGC ATCCGAATGC GGGCCTGCCG
AACGAGATGG GCGAGTACGA TCAGGATGCG GCGCAGATGT CGGCTCTGGT CGGCGAGTTC
GCAAAGTCAG GTCTCGTCAA CATTGTCGGC GGCTGCTGCG GCACAACGCC GGAGCATATT
CACGCCATTG CCGAGGCCGT GAAGGGCGCA ACGCCGCGTG CCAAGCCGGA GATAGAGCCG
CGCCTTCGCC TCTCCGGTCT CGAAGCTTTC ACGGCGGCCT GA
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| Protein sequence | MTREERIEKL KALSKERILV LDGAMGTMIQ GYKLTEADYR GELLKDHASD VKGDNELISL
AQPDILREIH LKYYRAGADF AETNTFGATS IAQADYHLEH LAYQMNVESA RIAREAADIA
ESETPGRVCF VAGVLGPTNR TASISPKVND PGFRNVNFDQ LVESYKEATK GLIEGGADTI
LVETIFDTLN AKAALFAIEE VFDELGFELP IMISGTITDM SGRLLSGQTP EAFWNSVRHV
KPFSIGLNCA LGAKEMRPHV ATLSRIADAG VSAHPNAGLP NEMGEYDQDA AQMSALVGEF
AKSGLVNIVG GCCGTTPEHI HAIAEAVKGA TPRAKPEIEP RLRLSGLEAF TAA
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