Gene Plav_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2285 
Symbol 
ID5455157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2452275 
End bp2452775 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID640877864 
Producthypothetical protein 
Protein accessionYP_001413556 
Protein GI154252732 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.16107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA AGCCTGCAAG CCCCGCGAAG AAGCGCACCC TCGCCCATGT CCAATGGGCA 
CAGGGCAAGT GCCGCTGCGG CGCCGTCCGC TTCGAGATCA TGGTCCCCGC CCTCTGGGCC
TGGCACGATC ATTCGCAGGC GACGCGCGAA ACGACCGGCG CCGCCGCCAT GTGCTGGGTC
GGAAGCTGGA AGAAGCGTTT CCGCCTCACC TCCGGCGAAG ACGACATCAC ACGCTACGAA
GAGCCCGGCA CCGCCCGCAG CTTCTGCCGC CGCTGCGGCA CGCCCCTCTT CTACGAGCGC
GACCGCTCCC GCCACGTCAT CAACATCCCC CGCGCCCTCT TCACCGCCCG CACCGGCCGC
GAACCCCGCT ACCATGCCGG CCTGAAGGAG ATGCCCGACT GGGCCTATAA TGGCGAACCC
CTGGCCCCGC TCAAAGCCTA TCCCGGCATC ATGATCGAGC GGAAAAGGAA GAAGAAACCG
CCGCCGGAAG GCATGTTCTG A
 
Protein sequence
MERKPASPAK KRTLAHVQWA QGKCRCGAVR FEIMVPALWA WHDHSQATRE TTGAAAMCWV 
GSWKKRFRLT SGEDDITRYE EPGTARSFCR RCGTPLFYER DRSRHVINIP RALFTARTGR
EPRYHAGLKE MPDWAYNGEP LAPLKAYPGI MIERKRKKKP PPEGMF