Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2285 |
Symbol | |
ID | 5455157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2452275 |
End bp | 2452775 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640877864 |
Product | hypothetical protein |
Protein accession | YP_001413556 |
Protein GI | 154252732 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.16107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACGGA AGCCTGCAAG CCCCGCGAAG AAGCGCACCC TCGCCCATGT CCAATGGGCA CAGGGCAAGT GCCGCTGCGG CGCCGTCCGC TTCGAGATCA TGGTCCCCGC CCTCTGGGCC TGGCACGATC ATTCGCAGGC GACGCGCGAA ACGACCGGCG CCGCCGCCAT GTGCTGGGTC GGAAGCTGGA AGAAGCGTTT CCGCCTCACC TCCGGCGAAG ACGACATCAC ACGCTACGAA GAGCCCGGCA CCGCCCGCAG CTTCTGCCGC CGCTGCGGCA CGCCCCTCTT CTACGAGCGC GACCGCTCCC GCCACGTCAT CAACATCCCC CGCGCCCTCT TCACCGCCCG CACCGGCCGC GAACCCCGCT ACCATGCCGG CCTGAAGGAG ATGCCCGACT GGGCCTATAA TGGCGAACCC CTGGCCCCGC TCAAAGCCTA TCCCGGCATC ATGATCGAGC GGAAAAGGAA GAAGAAACCG CCGCCGGAAG GCATGTTCTG A
|
Protein sequence | MERKPASPAK KRTLAHVQWA QGKCRCGAVR FEIMVPALWA WHDHSQATRE TTGAAAMCWV GSWKKRFRLT SGEDDITRYE EPGTARSFCR RCGTPLFYER DRSRHVINIP RALFTARTGR EPRYHAGLKE MPDWAYNGEP LAPLKAYPGI MIERKRKKKP PPEGMF
|
| |