| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2271 |
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| Symbol | |
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| ID | 5455493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2440104 |
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| End bp | 2441003 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877850 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001413542 |
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| Protein GI | 154252718 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.267884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACA TTCCCTTCGA CAAACGCGAC GGATTTATCT GGTTCAATGG CGAGCTCGTT
CCTTGGGCGG ATGCCAAGAT TCATGTGCTG ACACATGGGT TGCATTATGC CAGTTGCGTA
TTCGAAGGCT GCCGGATGTA TGGCGGCGAA ATTTTCAAGC TGCGCGAACA TTCGGAGCGG
CTGATCCGGT CGGCTGAAAT TCTCGGCTTT GAAATTCCCT ACAGCGTCGA GGAGATCGAC
GCGGCCTGCA TCGCCGCGGT GCGTGCGCAG AAACTGACAG ACGGTTATCT GCGGCCGGTT
GCGTGGCGCG GCAGCGAGAT GATGGGCGTC AGCGCGCAGA AGAACAAGAT CAACTTCGCC
GTGGCTGCCT GGGAGTGGCC GTCCTATTTC GATCCGGAGC AGCGCAAGAA GGGTATCCGT
CTCGATATCG CGAAGTACAA GCGTCCATCG CCCGAGACCG CGCCGTCGAT GGCGAAGGCG
GCGGGGCTCT ACATGATCTG CACCATCTCG AAGCATGCGG CGGAGAACAG GGGCTATGCC
GACGCGCTGA TGTATGATTA TCGCGGCTAT GTCGCGGAAG CGACCGGCGC GAACATCTTC
TTCGTGAAAG ATGGCGTCAT TCATACACCG AAGCCCGATT GCTTCCTTGA CGGCATCACG
CGGCAGACGG TGGTCGAGCT TGCGAAGGCG CGCGGTTACG AGATTCTCGA ACGCCACATC
ATGCCGGATG AACTGCCGAC CTTCTCGGAG TGCTTCATCA CGGGGACGGC GGCGGAAGTG
ACGCCGGTGG GCGAGATCGG ACCGCATCGT TACACGCCGG GTCAGATTAC GGCGACGCTG
TTCGGCGATT ACATGGCGGC GGTGAACCCG AAGCAGGCAG CTAAAGCGGC CAGCGCCTGA
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| Protein sequence | MADIPFDKRD GFIWFNGELV PWADAKIHVL THGLHYASCV FEGCRMYGGE IFKLREHSER
LIRSAEILGF EIPYSVEEID AACIAAVRAQ KLTDGYLRPV AWRGSEMMGV SAQKNKINFA
VAAWEWPSYF DPEQRKKGIR LDIAKYKRPS PETAPSMAKA AGLYMICTIS KHAAENRGYA
DALMYDYRGY VAEATGANIF FVKDGVIHTP KPDCFLDGIT RQTVVELAKA RGYEILERHI
MPDELPTFSE CFITGTAAEV TPVGEIGPHR YTPGQITATL FGDYMAAVNP KQAAKAASA
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