Gene Plav_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2264 
Symbol 
ID5455922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2434668 
End bp2435171 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID640877843 
Producthypothetical protein 
Protein accessionYP_001413535 
Protein GI154252711 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.652496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCT CTGTCGCCGA AGTTGAAGAA TTCGACGGCA ATCCACTCGA TCTTCTCGAA 
CAGGTCGCCA CAGTCCGCGA CTGGTTTTTC GAGAGGAGTC ACGAGGACGA ACTGAATATC
TGCGTCGCCG GCGAGTGGCG CGATTACCAG CTTTCCCTGA ACTGGCGGAA CGATCTCTCG
GGGCTCCACA TTGCCTGCAC GCTCGACCTT CGGGTGCCCC CGGAAAAACG GCCCGCAATC
CGCCATTTGC TGACACTGAT CAACGAGCAG CTCTGGTCCG GCCATTTCGA CATATGGTCC
GATGACGGCG TGGTTCTCTT TCGCAACAGC CTGCTTCTCT GCGGCGGGGC GGCGGCAACA
CCGGAACAGT GCGAGGCGCT GCTTCGTCTC GCCGTGGAAG CCTGCGAGCG CTATTATCCG
GCCCTGCAGT TCGTGATGTG GGCAGGTAAA TCGGCTGAAG AGGCGATTGC CGCCGCCATG
TTCGAAACGC AGGGATGCGC GTAA
 
Protein sequence
MSGSVAEVEE FDGNPLDLLE QVATVRDWFF ERSHEDELNI CVAGEWRDYQ LSLNWRNDLS 
GLHIACTLDL RVPPEKRPAI RHLLTLINEQ LWSGHFDIWS DDGVVLFRNS LLLCGGAAAT
PEQCEALLRL AVEACERYYP ALQFVMWAGK SAEEAIAAAM FETQGCA