| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2241 |
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| Symbol | |
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| ID | 5454582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2415925 |
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| End bp | 2416452 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877820 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001413512 |
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| Protein GI | 154252688 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.103501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC CACGGTTTAA GGTCACGCGC AATCTGTACA GAAGGCTCGT TTCCATGCGT
CTTGCGCTAT ACGAACCGGA CATTCCACCC AATGTCGGAA CGCTGATCCG GCTGGGGGCC
TGCCTCGGGG TTCCCGTCCA TATCATCGAG CCATGCGGCT TTCCCTGGAG CGACCGCGAC
CTTAAACGCG CGGCGATGGA CTATGGCGCG CTGGCCGATG TGACCCGTCA TGCCTCATGG
GCGGCATTCG CCGAGACCCG GACTGCGGCG TCGCGCCTCA TTCTCCTCAC CACCAAAACC
CATAATAATT TTATGGATTT CACGTTTCGC CCCGGCGACA CGCTGCTGAT CGGGCGCGAA
AGCGCCGGCG TCCCCGCCGA GGTTCACGAC GCGGCGGATG CGCGGGTGAC GATCCCCATG
CGGCCCCCTG CCCGCTCGCT GAACATGGCG GTGGCCGCCT CGATGGTACT GACGGAGGCC
CTGCGCCAGA CCGGCGGCTT TCCGGGGGCG GGCGAAATCG AAAGGTGA
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| Protein sequence | MTGPRFKVTR NLYRRLVSMR LALYEPDIPP NVGTLIRLGA CLGVPVHIIE PCGFPWSDRD
LKRAAMDYGA LADVTRHASW AAFAETRTAA SRLILLTTKT HNNFMDFTFR PGDTLLIGRE
SAGVPAEVHD AADARVTIPM RPPARSLNMA VAASMVLTEA LRQTGGFPGA GEIER
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