Gene Plav_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2233 
Symbol 
ID5456264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2408908 
End bp2409870 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content68% 
IMG OID640877812 
Producthypothetical protein 
Protein accessionYP_001413504 
Protein GI154252680 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTAA TCCGATCAAA CGCGGCCCCT TCCGGCGCGA TCGGTCTGCG CGAGCAGGCG 
GAAGCGCTTT CGGAGGCAAT GCCACCGCTC GTGACCGAGG CCGAACACGT CGCCTCGACG
GTCGCACAGG GCGTGCATGG CCGCCGCCGC ATCGGCATGG GCGAAACCTT CTGGCAGTTC
CGCCGCTTCC GCGAAGGCGA CACCGCCTCC TCCGTCGACT GGCGCCATTC GGCACGCTCG
GCGCATCTCT TCGTCCGCGA AACGGAGCGC GAGGCCGCCG AAAGCATCTG GATCTGGCGG
GACGGTTCCG CCTCGATGGA CTACGCCTCC GAATTCGCGC CCTGCACCAA GAAAGACCGC
GCCACCGTGC TCGCGCTCGC GCTCTCCTCC TTGCTCATTC AGGGCGGCGA AAGCGTGGCG
CCGCTTGGCG CCGGCTTCGC GCCGGTGCCG GGCCGCGTCG CCCTTCGCCG CATGGCACAT
GCGCTGCTCG ACGCGCAGCC CCTGGATGAA GCGGCGGCAA GTGCGGAAAG CGGCGCGCGC
GAAAGCCTGC CGCCGCCCGA GCATCTGCCG CGCTATGCGC AGGTCGTGCT CATCAGCGAC
TTTCTTTCGC CGCCCGAGGA AATCGTCGCC CGCATCAAGA GCTACGCCGC CGAAGGCATT
CGAGGCCATA TGATCCAGGT GCTGGACCCG GCGGAGGAAG ACCTGCCCTT CAGCGGCCGC
ACCGAATTCG AAGGCGTCGA GGAAGACATC CGCCTGATGA TCGGCCGCGC ACAGAACCTT
CGCGAGGCCT ATCACCAGCG GCTTGAAATT CACCGCAACC GCATCATCGA GACGGCGCGG
CGCATCAACT TCACCTTTGC GACGCACCGC ACCGACCGCG TGCCGCAAAC GGCGCTGCTC
GCGCTTTATG GCGCGCTCTC CGGCGCCATC GCCGCGCGCA AGCCGCCGCG GGCGGGCGTC
TAG
 
Protein sequence
MSLIRSNAAP SGAIGLREQA EALSEAMPPL VTEAEHVAST VAQGVHGRRR IGMGETFWQF 
RRFREGDTAS SVDWRHSARS AHLFVRETER EAAESIWIWR DGSASMDYAS EFAPCTKKDR
ATVLALALSS LLIQGGESVA PLGAGFAPVP GRVALRRMAH ALLDAQPLDE AAASAESGAR
ESLPPPEHLP RYAQVVLISD FLSPPEEIVA RIKSYAAEGI RGHMIQVLDP AEEDLPFSGR
TEFEGVEEDI RLMIGRAQNL REAYHQRLEI HRNRIIETAR RINFTFATHR TDRVPQTALL
ALYGALSGAI AARKPPRAGV