| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2146 |
|---|
| Symbol | |
|---|
| ID | 5453615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2327103 |
|---|
| End bp | 2327519 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877723 |
|---|
| Product | inner membrane protein |
|---|
| Protein accession | YP_001413417 |
|---|
| Protein GI | 154252593 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3686] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCG AAATCGCGAT GCTGTTCTGG GCCGCCGTGC TGGGGCTCGT GCAGGTGGGC
GCGCAGAGCT TTGCCTACAA GGCGCAGGAA GGGAATTCCT ATACCGTGGG CGCGCGGGAC
GAGCATCGGC CTGCAGCCGG CCTTGCCGGG CGCATGGAGC GCGCGCTCCG CAACTTCTTC
GAAACTTTTC CGATCTTCGC GGCGGTTATC CTTGCCGTCT ATGCCACCGA ACGCTCGAAC
CAATGGAGCG AGATCGGCGC GCAGGTCTAT TTCTGGGGGC GGCTTGCCTA TGTACCGGCC
TATGCAGTCG GCCTGCCCTG GATCAGAACC TTCATCTGGC AGATCGCGAC CATCGGCATC
GTGCTTTGCA TGGTACCGCT GTTCGACAAG GCGCTGCTGA CCGTGCTGAC GGAATAA
|
|---|
| Protein sequence | MTVEIAMLFW AAVLGLVQVG AQSFAYKAQE GNSYTVGARD EHRPAAGLAG RMERALRNFF
ETFPIFAAVI LAVYATERSN QWSEIGAQVY FWGRLAYVPA YAVGLPWIRT FIWQIATIGI
VLCMVPLFDK ALLTVLTE
|
|---|
| |