| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2141 |
|---|
| Symbol | |
|---|
| ID | 5456757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2322961 |
|---|
| End bp | 2323629 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640877718 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001413412 |
|---|
| Protein GI | 154252588 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACAAAT TGACCAGGTT GAAGTCCATC CTGCCTGTGT TGCTGGCGGC GGCGATTGGC
CCGCTGGCAC CTGCAATGGC GGAACCCACG GCCGCCGTGC AGGCGCTGCG CGATGAAATC
GTCGCCACGC AATACAAGTC GATCATCAAT TGCGAGGGGT GCAACCTCGC CGGTGCGAAT
TTCGACGGGC AGTTCCTGCG CCTCGCCGCC CTTCAAGACT CGGACATGCG GGGCGCGAGC
TTTCGCGGCG TCGACATGAC GGGGGTTCAC TTCAATCGCG CGAAGCTGGA CGGCGCGAAT
TTCGCGGGTG CCAACATGGC GGGCGCTGTA TTGCTGGGCG CGAGCCTGCG CGGGGCGGAC
CTTTCCGACA CAAGGCTCGA TGCCGTACGC GTGCATGATG CGGATTTCAC CGGCGCGAAC
CTGCAACGCG CCAATCTGCG CATGCTCGAA TATGTGAAGA ACCTGACCTT TGCGGACGCG
GATGCGCGCG GCGCGAATTT CCGCCATGCC TTTCTCGGTC GCGTGGACTT CACCGGCACC
GACCTTCGTG GCGCGGACTT CACCCGCGCC ACCGGTCTCA AAAACGAGCA ACTGGCGCGT
GCCTGTGGCG ACGAAACGAC AATATTGCCG CCTGACCTGA CGATCCCGAA ATGCGGCGAC
GGCAGCTAG
|
|---|
| Protein sequence | MNKLTRLKSI LPVLLAAAIG PLAPAMAEPT AAVQALRDEI VATQYKSIIN CEGCNLAGAN
FDGQFLRLAA LQDSDMRGAS FRGVDMTGVH FNRAKLDGAN FAGANMAGAV LLGASLRGAD
LSDTRLDAVR VHDADFTGAN LQRANLRMLE YVKNLTFADA DARGANFRHA FLGRVDFTGT
DLRGADFTRA TGLKNEQLAR ACGDETTILP PDLTIPKCGD GS
|
|---|
| |