Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2099 |
Symbol | |
ID | 5454011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2282297 |
End bp | 2283259 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877676 |
Product | hypothetical protein |
Protein accession | YP_001413370 |
Protein GI | 154252546 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.157749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00162908 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGAAGG ACTACAAGGA CGGCTTCGGG CTTTCTCAAC CGCGAACTTA CCTGACGAGA ATGTTCCTCT TCATCATTCT CGCCTGCTTC GTGGTAGCGA TCCTCTATCG GCAAATCGAG ATCGCCTTCC TCGCCAATCC GGGACTGAAC GGTCTTATCC TCGGCGTGCT CGTCATCGGC ATCCTCTATG CCTACCGCCA GGTACAGGCG ATCGGCCCCG AAGTCCGCTG GGTGAACGAT TTCCGCCGTG CCGATCCGGG CCTTGCCCCG CCTCCGCCGC CTCGCCTGCT CGCGCCCATG GCAACCATGC TCGGCGACCG CAAAGGCCGC ATGCAGCTCA ACGCCATGTC GATGCGCTCG ATCCTCGATT CGCTCGGCTC GAGGCTCGAC GAACAACGCG AAATATCCCG CTACATCATC GGCCTCCTCA TCTTCCTCGG CCTTCTCGGC ACCTTCTGGG GCCTGCTGAC AACGGTGACC TCGGTTGCCG GCACGATCCA GGGCCTCAGC GTCGAAACGG CGGACCCAGC CACCGTCTTC GCCAATCTCA AAGCCGGCCT CGACGGCCCG CTGCGCGGCA TGGGCACGGC CTTCTCGTCT TCGCTGTTCG GCCTGGCTGG ATCGCTCCTG CTCGGCTTTC TCGACCTGCA GGCGGGCCAG GCTCAAAACC GCTTCTACAA TGAACTCGAG GAATGGCTTT CCACCGTGAC CAATCTCGGC GAGATCGACC CCTCTGGCCC CGCCCTGCTG AACGAGACGG CACGCCGCCT GCGCAGCATC GAACAATCCC TGTCGAGCGG AGAAAGCCCC TCCAGCGCCT CCCTGATGGC GCTGACGGGC CAGATAACGG CGCTGACCGA GCAGATGCGG AACGAGCAGC AACTCATCCG CCAGATGGCG CAGAACCAGC AGGGCTTGCA GCCGGTTCTC GAGGAAATCG CCCGCCATCT GCGCGAGGAC TGA
|
Protein sequence | MAKDYKDGFG LSQPRTYLTR MFLFIILACF VVAILYRQIE IAFLANPGLN GLILGVLVIG ILYAYRQVQA IGPEVRWVND FRRADPGLAP PPPPRLLAPM ATMLGDRKGR MQLNAMSMRS ILDSLGSRLD EQREISRYII GLLIFLGLLG TFWGLLTTVT SVAGTIQGLS VETADPATVF ANLKAGLDGP LRGMGTAFSS SLFGLAGSLL LGFLDLQAGQ AQNRFYNELE EWLSTVTNLG EIDPSGPALL NETARRLRSI EQSLSSGESP SSASLMALTG QITALTEQMR NEQQLIRQMA QNQQGLQPVL EEIARHLRED
|
| |