Gene Plav_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2099 
Symbol 
ID5454011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2282297 
End bp2283259 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID640877676 
Producthypothetical protein 
Protein accessionYP_001413370 
Protein GI154252546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.157749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00162908 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAGG ACTACAAGGA CGGCTTCGGG CTTTCTCAAC CGCGAACTTA CCTGACGAGA 
ATGTTCCTCT TCATCATTCT CGCCTGCTTC GTGGTAGCGA TCCTCTATCG GCAAATCGAG
ATCGCCTTCC TCGCCAATCC GGGACTGAAC GGTCTTATCC TCGGCGTGCT CGTCATCGGC
ATCCTCTATG CCTACCGCCA GGTACAGGCG ATCGGCCCCG AAGTCCGCTG GGTGAACGAT
TTCCGCCGTG CCGATCCGGG CCTTGCCCCG CCTCCGCCGC CTCGCCTGCT CGCGCCCATG
GCAACCATGC TCGGCGACCG CAAAGGCCGC ATGCAGCTCA ACGCCATGTC GATGCGCTCG
ATCCTCGATT CGCTCGGCTC GAGGCTCGAC GAACAACGCG AAATATCCCG CTACATCATC
GGCCTCCTCA TCTTCCTCGG CCTTCTCGGC ACCTTCTGGG GCCTGCTGAC AACGGTGACC
TCGGTTGCCG GCACGATCCA GGGCCTCAGC GTCGAAACGG CGGACCCAGC CACCGTCTTC
GCCAATCTCA AAGCCGGCCT CGACGGCCCG CTGCGCGGCA TGGGCACGGC CTTCTCGTCT
TCGCTGTTCG GCCTGGCTGG ATCGCTCCTG CTCGGCTTTC TCGACCTGCA GGCGGGCCAG
GCTCAAAACC GCTTCTACAA TGAACTCGAG GAATGGCTTT CCACCGTGAC CAATCTCGGC
GAGATCGACC CCTCTGGCCC CGCCCTGCTG AACGAGACGG CACGCCGCCT GCGCAGCATC
GAACAATCCC TGTCGAGCGG AGAAAGCCCC TCCAGCGCCT CCCTGATGGC GCTGACGGGC
CAGATAACGG CGCTGACCGA GCAGATGCGG AACGAGCAGC AACTCATCCG CCAGATGGCG
CAGAACCAGC AGGGCTTGCA GCCGGTTCTC GAGGAAATCG CCCGCCATCT GCGCGAGGAC
TGA
 
Protein sequence
MAKDYKDGFG LSQPRTYLTR MFLFIILACF VVAILYRQIE IAFLANPGLN GLILGVLVIG 
ILYAYRQVQA IGPEVRWVND FRRADPGLAP PPPPRLLAPM ATMLGDRKGR MQLNAMSMRS
ILDSLGSRLD EQREISRYII GLLIFLGLLG TFWGLLTTVT SVAGTIQGLS VETADPATVF
ANLKAGLDGP LRGMGTAFSS SLFGLAGSLL LGFLDLQAGQ AQNRFYNELE EWLSTVTNLG
EIDPSGPALL NETARRLRSI EQSLSSGESP SSASLMALTG QITALTEQMR NEQQLIRQMA
QNQQGLQPVL EEIARHLRED