Gene Plav_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2098 
Symbol 
ID5454385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2281274 
End bp2282290 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID640877675 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001413369 
Protein GI154252545 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0859782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.000615141 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCTCT CAAGCAGACG CATTCGAGGA CGCGCTCCCA GCGCGGATTA CTGGCCGGGC 
TTCGTCGACG CCATGTCGAG CCTGTTGCTG GTGCTCATCT TCCTCCTGAC CATCTTCATG
ATCACGCAGT TCTTTCTGAG CCAGCTGGTC AGCAACAAGG ATTCCGCGCT GGAGAACCTG
CGCAGCCAGA TCGCCGAACT CGTGAACCAG CTCGCCCTTG AACGGAGCGA GAAGGCCGAT
CTGCAGGCAA CGATCCTGTC GCTGCAGGAC TCGCTCGCAG CGGCGACCGC AGAAAAAGAC
CGGCTTGCCA GCCTCGCCGA CGATGCGTCC GGCACGCGTG TCGCTGAACT CGAAGGCAAG
CTGGCCGAGG AACAGAAACT TTCGAGCGAG GCACTATCTC AGGTTGAGCT TCTGAACCAG
CAGATATCCG CGCTCCGCCG CCAGCTCGCA ACACTGGAAG CGGCGCTTGA AGCCGCCGAA
CTGAAAGATC GCGAGCAACA GGTTCAGATC GCCGATCTCG GCCGCCGACT GAATGCCGCT
CTCGCTCAGA AGGTGCAGGA GCTGGCGAAA TACCGCTCGG AATTCTTCGG GCGCCTGCGC
GCCATTCTGG GCGACCGTCA GGACATCGAG ATCGTAGGCG ACCGCTTCGC CATGCAATCG
GAAATCTTCT TCGAGTCAGG TTCCGCGGAC ATCAACCCAT CGGGCAAGGA GCAACTGGAC
AAGATAGCGA CAGCAGTGCG CGAGATTGCC GCCGAGATTC CCGACGATAT CCCTTGGGTC
TTGCGCGTCG ACGGTCACAC CGACGCCAAC CCGATCGCGA CGGCGCAGTT TCCATCGAAC
TGGTATCTCT CCAGCGCCCG CGCCATCGCC GTCGTGAACT ACCTGGTAGA ACGAGGCGTG
CCGCAGAACA GGCTCGTCGC AGCAGGCTTC GGGCAATATC ACCCGTTGGC CGATGGTCGT
GGCACTGCGG AAAACCGCCG CAATCGCCGT ATCGAATTCA AGCTGACGGA GCGTTGA
 
Protein sequence
MALSSRRIRG RAPSADYWPG FVDAMSSLLL VLIFLLTIFM ITQFFLSQLV SNKDSALENL 
RSQIAELVNQ LALERSEKAD LQATILSLQD SLAAATAEKD RLASLADDAS GTRVAELEGK
LAEEQKLSSE ALSQVELLNQ QISALRRQLA TLEAALEAAE LKDREQQVQI ADLGRRLNAA
LAQKVQELAK YRSEFFGRLR AILGDRQDIE IVGDRFAMQS EIFFESGSAD INPSGKEQLD
KIATAVREIA AEIPDDIPWV LRVDGHTDAN PIATAQFPSN WYLSSARAIA VVNYLVERGV
PQNRLVAAGF GQYHPLADGR GTAENRRNRR IEFKLTER