| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2056 |
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| Symbol | |
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| ID | 5454617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2244080 |
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| End bp | 2245606 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877633 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_001413327 |
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| Protein GI | 154252503 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.153569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000238933 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCCGAC AGCTTTCCGA CGAGGAAATC GCCACACTGG TCCCCGCCGA ACTTGCGCGG
AATGCGACAC CGATCCCCAT GCAGATCGTC TCGAGCGACG AATTTCCTCC CTCGCCGCAG
ACAAGAGAGC AGCGCGAAGT CGAAGCACGG CTCCTCAGCA TGGCCGGTGA TCTGGCCGCG
AAGCAGGGCA TCTCGCGCCG CCGTTTTTTC CAGACTGCGT CCGGTATGGC GGCCTCCTTC
CTGGCGATGA ACCAGGTCTA TGGCCCGCTC TTTTCCGTGA GCGCGGCTGA AGCGGCGACA
CCCGACATTG CGGCGGCGCG CGCGGTTTCG CTCCGCGATC AGTTCATCAT GGACATGCAC
ACGCATTTCC TGCGCGACGA TACGCGGCTT ACAAGTTTTG TGCGCATGCG GGAGGCTGTG
GGAAAGGCGG GCTGGAACGA CGCCCTCTCC GCAGGGGAGC AGACCATCGA GGATTTGAAA
TACGAGAATT ATATCAAGGA AGTTTTCCTC GATAGCGATA CGAAGGTTGC TTTGATCTCG
AGCGCGCCTT CGGAAGTGCC GGAGGACTGG TTTCTCACCA ACAGGCAGAT GGCGGAAGCG
CGTGAGAAAG TAAATTCGCA ATCGGGATCG AAGCGGCTCT ATTCCCACGC CATATTCACG
CCGGGCTATC CCGGCTGGCT CGACGATCTC GACGCCGCGC TGGAACTCAA GCCCGATTCC
GTGAAGGGCT ACACGATCGG CGACAACACC CACAAGGATC TGAGCCGCCA CCCGTGGCGC
ATGGATGACG AGGACCTCAC CTATAAAGCC TATGAGAAAT GCCTGAAGGC TGGTGTGAAG
AACATCTGCG TTCACAAGGG GTTGTTCAAT CCGGCGACCG AAAAGGAGTT TCCGCATCTT
CGCGCCTATG CCGATGTCTC CGATGTCGGC AAGGCGGCGA AGGACTGGCC CGATCTCAAC
TTCATCATCT ACCACTCGGC CTATCGCTTT GTCGGCAGCG ATCCGTCCGT GGCTCTCGAT
CAGTTCGAGA AGACGGGCCG TATCGAGTGG ACGACGGATC TTGCTGAAAT TCCGGAGAAA
TACGGCGTCA CCAATGTTTA TGGCGATCTC GGCCAGATAT TTGCCGTCAA CGTCGTTGCC
CAACCGCGTA TCGCCGCCGC GGTCATGGGA ACTCTGGTCA AGGGGCTGGG CGCGGAGCGT
GTCTGCTGGG GCACCGATGC GGTCTGGACC GGTTCGCCCC AATGGCAGAT CGAGGGTTTG
CGGCGGCTCG AAATTCCGGA GGAAATGCAG AAAGCGCATG GCTTTGCGCC GCTGGGTGCT
GCCCACGGGC CGGTGAAAGC GGCGATCTTT GGCGGCAATA ATGCCCGGCT TTACGGCATC
GACCCTGAGG AGGCCTGGCA GAGCATGAAG GATGACAGGA TGTCAAAGCG CCGCGAGGGC
TATCTTCGCG AGGGCGCGAA TCCAGCCCAC ACGCGCTATG GCTTTATGTA TCCGGACGGC
ACCCCGCCGC ACCGCGCCTT TACCTGA
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| Protein sequence | MGRQLSDEEI ATLVPAELAR NATPIPMQIV SSDEFPPSPQ TREQREVEAR LLSMAGDLAA
KQGISRRRFF QTASGMAASF LAMNQVYGPL FSVSAAEAAT PDIAAARAVS LRDQFIMDMH
THFLRDDTRL TSFVRMREAV GKAGWNDALS AGEQTIEDLK YENYIKEVFL DSDTKVALIS
SAPSEVPEDW FLTNRQMAEA REKVNSQSGS KRLYSHAIFT PGYPGWLDDL DAALELKPDS
VKGYTIGDNT HKDLSRHPWR MDDEDLTYKA YEKCLKAGVK NICVHKGLFN PATEKEFPHL
RAYADVSDVG KAAKDWPDLN FIIYHSAYRF VGSDPSVALD QFEKTGRIEW TTDLAEIPEK
YGVTNVYGDL GQIFAVNVVA QPRIAAAVMG TLVKGLGAER VCWGTDAVWT GSPQWQIEGL
RRLEIPEEMQ KAHGFAPLGA AHGPVKAAIF GGNNARLYGI DPEEAWQSMK DDRMSKRREG
YLREGANPAH TRYGFMYPDG TPPHRAFT
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