| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2054 |
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| Symbol | |
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| ID | 5454150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2242591 |
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| End bp | 2243034 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877631 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001413325 |
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| Protein GI | 154252501 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0000000754115 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACCGACG ATCTCCTCGA AGAAAACACG ATCGCCTTGC CCGAGGGCTA CACGAACCTC
AACTGGTTCC ATGGTTTCGG CCGTCAGATC GGGCCGCTCT ACGAGAAGAT CGAGACGGAT
GGCGGCTACA CACGCGCCTT CCTCGTGCAG GAGTATCACA CCAATGGCAT GGGCAATTGC
CATGGCGGAA TGCTGATGGC TTTCGCCGAC ATGGCATTTG GCCATGCAAT CACCATGAGC
ACCCATCGCT ACTGGGTGAC GGTGCGCCTG CTGACGGATT TCCTGTCCGG TGCGAAGATC
GGCGAGTGGG TGGAAGGCAC TGGCGAGGTC GTCGGCGCGG AAGATGATTT CTTCACGGTG
CAAGGGCGCA TCTGGTGCGG CGACCGTACC ATCATGTCCG GCACCGGCGT CTTCAAGGCA
CTCGGCGAAA GGCCGCCCAA ATGA
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| Protein sequence | MTDDLLEENT IALPEGYTNL NWFHGFGRQI GPLYEKIETD GGYTRAFLVQ EYHTNGMGNC
HGGMLMAFAD MAFGHAITMS THRYWVTVRL LTDFLSGAKI GEWVEGTGEV VGAEDDFFTV
QGRIWCGDRT IMSGTGVFKA LGERPPK
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