Gene Plav_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2032 
Symbol 
ID5455955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2219546 
End bp2220385 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID640877609 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001413303 
Protein GI154252479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.713933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC TGTCACTTCA GCCGGAAAAT TCTCGGTCAC AGCCTTTCGA ATTGGTGAAC 
CCCGGCGGTT CTCCGGGCTT TCTCGTCCTT TGCGACCATG CCTCCAATGC CTTGCCGGAG
GGCTATGGCA GCCTTGGCCT CGCGGCGGCG GAGTTCGAGC GCCATATCGC CTTCGATATC
GGTGCCGCCG GTGTCGCCCG GCACCTCTCG GCGCTACTCG ATTGCCCGGC CGTGCTCGGG
CGCTATTCGC GCCTCCTCGT CGATCTGAAC CGGGGCGAGG ACGATCCGAC CATCGTCATG
AAATTGTCCG ACGGTGCGGT CATTCCCGGC AACCGGGATG TCGATGCGCA TCGAGGCGCC
GTGGAATTCG CGCATCGCAT CGCCGCCTTC CACGCGCCTT ATCACGATGC CGTGGAGCGC
ATGATCGCGC GGGCGCGGGC GGCGGATACC GTTCCCGTCC TCATCTCCGT CCACAGCTTC
ACGCCGCGCT GGCGCGCCCA TATCCGCCCC TGGCATACCG GCATTCTCTG GGACAAGGAC
GGCCGCCTGC CCGTGCCGCT CATGGCCGCG CTGCGCGAGG ATGGCGACAT CGTCGTCGGC
GACAACGAGC CCTATACGGG CCGTCTCAAG AATGATTGCC TCTATCGTCA CGCGACGATG
CACGGGCTGC CCCACGCGCT TATCGAAATC CGGCAGGACC TGATAGAGAC GGAAGAAGGG
CAGGCGGCAT GGGCGGCGCG TTACGCGCGC CATCTTGGTC CCATCTGCGC CATGCCCGGC
CTTCGCGCTA TCCGGCATTT CGGCTCGCAT GCCGATCCCG CCCTCCCCAT ATCGCAATGA
 
Protein sequence
MRDLSLQPEN SRSQPFELVN PGGSPGFLVL CDHASNALPE GYGSLGLAAA EFERHIAFDI 
GAAGVARHLS ALLDCPAVLG RYSRLLVDLN RGEDDPTIVM KLSDGAVIPG NRDVDAHRGA
VEFAHRIAAF HAPYHDAVER MIARARAADT VPVLISVHSF TPRWRAHIRP WHTGILWDKD
GRLPVPLMAA LREDGDIVVG DNEPYTGRLK NDCLYRHATM HGLPHALIEI RQDLIETEEG
QAAWAARYAR HLGPICAMPG LRAIRHFGSH ADPALPISQ