Gene Plav_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2002 
Symbol 
ID5456612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2188943 
End bp2189776 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content58% 
IMG OID640877579 
Producthypothetical protein 
Protein accessionYP_001413273 
Protein GI154252449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.465014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAT CATCGAAACT TGCACAAAAA CTCATGTTTG TCGTTGCCGC GCTGGTACTG 
ATGCACGGCT CGCCTGTCAT GGCCGAAACC GCCTTGCCGC CGGAAAGCGA CCCTGCGGCG
CGCGGCCTCG CCGTCGTCGA GGAAATGGAT GGCCGGGACC GTGGCTGGGG CGACGCGCGC
GCGAAGCTGA AAATGATCCT GACCAACTCG GCGGGAGACA CGAGCGAGCG TGAACTTCGC
CTGATGATGC TGGAGGTGAC GACGGCCAAT GAAGGCGACT TGAGCCTGAT GATTTTCGAC
AAGCCGCGCG ACATCGAGGG GACGGCATTG CTGACCCATG CGCATGTGAA TGCGCCGGAC
GATCAATGGC TATACCTTCC TGCCGTGAAG CGCGTGAAGC GTATTTCCTC CGCCAATAAG
GCAGGCCCCT TTGTCGGCAG CGAATTCGCC TTCGAAGACC TCGCGGCCCA GGAGGTTGGA
AAGTTCACTT ACAAATGGCT TCGCGATGAA GCCTGCGGCG CCCTCACCTG CCATGTCGTC
GAGCGGGTGC CCGCCTATGA AGGTTCCGGC TACACGCGCC AGATCGTATG GATCGATACC
ACCGACTACC TTCTGCGCAA GACGGACTAT TACGACAGAA AGGAAAGCCT GCTCAAGACG
CTCGAGTTTG GCGAATACAA GAGCTATCTC AACGGTATCT GGCGTCCGCA AACGCTCGAA
ATGGCGAACC ATGAAACCGG CAAGAAAACA AAACTCGTCT GGGAAAGCTA CGAGTTCAAG
ACAGGGTTAA CGGGAAATGA TTTCTCCACG GCAAGCCTCG AAAGAGCCCG CTAA
 
Protein sequence
MAGSSKLAQK LMFVVAALVL MHGSPVMAET ALPPESDPAA RGLAVVEEMD GRDRGWGDAR 
AKLKMILTNS AGDTSERELR LMMLEVTTAN EGDLSLMIFD KPRDIEGTAL LTHAHVNAPD
DQWLYLPAVK RVKRISSANK AGPFVGSEFA FEDLAAQEVG KFTYKWLRDE ACGALTCHVV
ERVPAYEGSG YTRQIVWIDT TDYLLRKTDY YDRKESLLKT LEFGEYKSYL NGIWRPQTLE
MANHETGKKT KLVWESYEFK TGLTGNDFST ASLERAR