| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1928 |
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| Symbol | |
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| ID | 5454453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2100670 |
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| End bp | 2101332 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877505 |
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| Product | hypothetical protein |
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| Protein accession | YP_001413200 |
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| Protein GI | 154252376 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.238689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.284182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCCGCAC GTTGCTCACT CGCTGTGAGA AGGGAGCGGC CGGTCGCAAA CGGCTTTGTA
CGACAGGAGA GACAAGTGAC ACTCACCAAC TCAAACGCAT CAACCATAGC GGCGCCCGGT
CTTTCTCCGA AAGGCGAAAG CAGACAGCCC GCTCGCGCGG ACGCGCCTGT CCGTCTTCTG
AGGGCGGGCA ATGAAGATAT AACGATCGGC GAGAACAGCA TCCTTGAGGG CTCATTCGAC
ACGCAAGGCT CCATGTTCGT CGATGGCGCC GCGATAAACG CGGATTTGCG GGCGGCGCAA
CTTTCGATCG GCGCTACCGG CCGTGTCGAA GGGCAGGCAA CCGTTCTCCG CGCTGAAATA
GCGGGCACGT TCGATGGAAC GCTCATGTGT TCGGGCGAGG TCATCCTCCG TTCGTCGAGC
AGGATCAGCG GGGAACTGAA ATGTGCCAAG CTCGTCACGC ATAGAGGTGC CGTCATCGCT
GCCGAGATCC ATATCGTCAG CGACGAAGAA GGCGGCGAAG AGGCGATAGC TGGCCTGTCC
GGGTTTCCGC CGTCCTGGCC GACACCGTTC TGGAGCCGGC GCAGGATCAG GAAGCTTCTT
CCTTACGGGT ACGGCGCCTT CCTGACCCTC GGGGCCATGG GAATCTGGTC GTTCTTCGCC
TGA
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| Protein sequence | MPARCSLAVR RERPVANGFV RQERQVTLTN SNASTIAAPG LSPKGESRQP ARADAPVRLL
RAGNEDITIG ENSILEGSFD TQGSMFVDGA AINADLRAAQ LSIGATGRVE GQATVLRAEI
AGTFDGTLMC SGEVILRSSS RISGELKCAK LVTHRGAVIA AEIHIVSDEE GGEEAIAGLS
GFPPSWPTPF WSRRRIRKLL PYGYGAFLTL GAMGIWSFFA
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