| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1924 |
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| Symbol | |
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| ID | 5454521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2095008 |
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| End bp | 2096102 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877501 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001413196 |
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| Protein GI | 154252372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.848002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCGTTCG TTGAACATAG CAACGCTCCA GTGGAAGCGC CTGTTGCGCT GATTACCGGG
ATTACCGGCC AGGATGGCGG CTATCTCGCC GAGTTGCTGC TCGGCAAGGG ATATATCGTC
CATGGGCTAG CGCGCGCGCC GGCGCGGCTG GACCGGGCGA GGTTTTCCCG TTTCGGGGAG
TTGCGCGGCC GGCTTCACCT TCACGTTTGT GACCTGCGGG ACGGCGATAC GCTTGAGAAT
GTGTTGCGTG TAGTGCGGCC GAACGAGATC TACAATCTCG CCGCGCAGAC GCATGTTCAG
ACAAGCCTGG AAGATCCAGC CTATACGACC GACGTGAATG CAGCGGGCAC CGTGCGGCTG
CTCGAGATTT TGGTGAAATT GGGCCACGAG CGGCACAGCA GGTTCTTTCA GGCGTGCAGC
TCGGAAATAT TCGGCGATGC GCGGGGTGTT CCTCAAAACG AGAAGACGCC GCTCCATCCT
CTCAATCCCT ATGCGGCGTC CAAGCGGGCT GCATTCGAAG CGGCGGTCCA TTTTCGCAAT
GCTACCGGCG TCTTTGCGTC GAATGGCATT CTGTTCAATC ACGAAAGTCC CTATCGAAGT
CCGTCTTTCG TAACGCGCAA GATATCGCTT GCCGTTGCGG CGAGCCAACG AGGGGAGAAA
ACCCCTCTGA GTTTAGGCAA TCTCGATGCG CGCCGTGACT GGGGGCATGC CGGCGACTAC
GTTCGTGCCA TGTGGCTGAT GCTGCAGCGG GAGAAGCCGG ACGACTTTGT TCTCGCGACC
GGCGAGACTC ATTCGGTAAG GGAATTTGTA GAGCTCGCTT TCGGGGTCAT CGGCAGCCGG
ATCATATGGG AAGGATCGGG AGTGAGGGAG CGAGGCGTTG ATGCCGCGAG TGGCCAGGTG
CTTGTCGAAA TCGATCCGGC CTTCTTCCGC GCCGCCGATG CCGGCATGAC CCTTGGCGAT
GCATCCAAGG CAAGAGCCGA ACTGGGCTGG CGCCCGGAAG TGGGCTTCGA AAATCTGGTG
AGGGAAATGG TGATGGCGGA TATCGAACGA ATGGCTGCTC CGTCCGAAGC CGAGGCCAGG
GTTGCGTCCG ATTGA
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| Protein sequence | MAFVEHSNAP VEAPVALITG ITGQDGGYLA ELLLGKGYIV HGLARAPARL DRARFSRFGE
LRGRLHLHVC DLRDGDTLEN VLRVVRPNEI YNLAAQTHVQ TSLEDPAYTT DVNAAGTVRL
LEILVKLGHE RHSRFFQACS SEIFGDARGV PQNEKTPLHP LNPYAASKRA AFEAAVHFRN
ATGVFASNGI LFNHESPYRS PSFVTRKISL AVAASQRGEK TPLSLGNLDA RRDWGHAGDY
VRAMWLMLQR EKPDDFVLAT GETHSVREFV ELAFGVIGSR IIWEGSGVRE RGVDAASGQV
LVEIDPAFFR AADAGMTLGD ASKARAELGW RPEVGFENLV REMVMADIER MAAPSEAEAR
VASD
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