Gene Plav_1896 details

Gene Information

• Locus tag: Plav_1896
• ID: 5456626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Parvibaculum lavamentivorans DS-1
• Kingdom: Bacteria
• Replicon accession: NC_009719
• Strand: +
• Start bp: 2058697
• End bp: 2059479
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640877473
• Product: abortive infection protein
• Protein accession: YP_001413168
• Protein GI: 154252344

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.692997
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 47
• Fosmid unclonability p-value: 0.154839
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGGGCC TGGAAGAAGA ACCGGCGTCG CGTCCTCCTC ACTCCTGGTG GGATATTGTG 
GCGGTGCCGC TGCTCGCCAT GGCGATGGCG GCTGTGGCTG CAGGAGGTGC GGCCCTTCTC 
TATGTTTTCA TGCAGGAAAT TCCGCTGGCG GAACTCCGGG AGACGGCAAC GCGCGCGTTC 
CGCTCGACCT ATGTCGTTTA TGGCGCACAG GCGGTGCTCT ATCTGGCAAT CGTCTTTTCG 
GTCTGGGTGG TTCTGGCGTT GCGCGGATAC CGCCTCCTTC CAACGCATTT TGCCGCCACT 
CGCGCGCGCT CCTTGCTGGC GGCTGTCGCT ATCGGCGCCA TGCTTGCGAT CCTCGCCGTG 
CTTTTGCTGT CGCTTCTGCC GGAGGACACG CAGCGCCAGC TTGTCGAGGG GAGCGAACTT 
CTGATGCCGG AGACGGTGGG GGAAGCCCTG ATGCTGCTCG TCATTGCCGC CCTGCTGGCG 
CCGCTGGTGG AGGAGCTCTA CTTTCGCGGC ATCGTGCTCC GCGTGCTCGA GGGCAGGTTT 
TCCTTTGCCG TGGCTGCGGC GATCACCGCC GTCTTTTTCA CGCTGATGCA CGGGCATCTG 
TTCAACCTTC CCGGCCTTGG CGGGTGGGTG CTGACAGGCG TGATTTTCAT TCTCGGTATG 
GTGCTGGCAT GGTCGGTACG GTGGAGCGGC TCGCTCCGCC CCGCCATTGC CATGCATGCG 
GCCTATAATT TCACGCTTCT GGCGCCCGGC ATGGCGGCCA TGCTGACGGG CGTTCAGACG 
TAG 

 

Protein sequence

MPGLEEEPAS RPPHSWWDIV AVPLLAMAMA AVAAGGAALL YVFMQEIPLA ELRETATRAF 
RSTYVVYGAQ AVLYLAIVFS VWVVLALRGY RLLPTHFAAT RARSLLAAVA IGAMLAILAV 
LLLSLLPEDT QRQLVEGSEL LMPETVGEAL MLLVIAALLA PLVEELYFRG IVLRVLEGRF 
SFAVAAAITA VFFTLMHGHL FNLPGLGGWV LTGVIFILGM VLAWSVRWSG SLRPAIAMHA 
AYNFTLLAPG MAAMLTGVQT