| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1888 |
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| Symbol | |
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| ID | 5454076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2047894 |
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| End bp | 2048715 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877465 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001413160 |
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| Protein GI | 154252336 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.140103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAC TCATCAACCG GCGGCCGGAT GCGGTGACGC AGCTCGCGCT CATGCTTCTG
CCGTTCGTCA TCGTCGTCAT CTGCTACATG GTGGCCTCCG AGGCGCGGCT TTCGGAAAAT
CCGAACGACA AGCTGCTTCC CGGATGGTCG ACCATTGCAG CGGCGATCGA GCGCATGGCG
TTTCTGCCCG ACCCGCGCAC GGGCAACTAT CTTCTATGGA GCGACACGGT TTCGAGCCTG
ACGCGGCTCG GTATCGGCGT CGCGGTGGCA ACGGTCATCG GCGGGATCTT CGGCATTCTT
CAGGGACTCG TCCCCTACTT CCGGGCGACG TTCAACGCCT TTACCGGCGT TCTGTCGATG
ATCCCGCCGC TTGCCGTGCT GCCTATTCTC TTCATCATCT TCGGGCTTGG CGAACTGGCG
AAAGTGGTTC TGGTCGCGGT CGGCATCACG CCTTTTATCA TTCGCGACCT TGCCTTGCGC
ACCGCCGAAA TTCCGCATGA GGAAATCATC AAGGCGCAAA CGCTTGGTGC TTCGACATGG
CAGATCATCC TGCGCGTCGT GGTGCCGCAG ATGCTGCCGC GCCTCATCGA CGGCGTGCGG
CTTTCGCTTG GCGCCGCCTG GCTCTTTCTG ATCGCGGCGG AAGCCATCGC TTCCGACAGC
GGGCTCGGCT ACCGGATATT CCTGATGCGC CGCTATCTCG CGATGGATGT GATCCTGCCT
TATGTCGCTT GGATCACCAT CCTTGCCTTC TCGCTCGACC TTGCGCTGCG GCTCTTCCAG
AGAGTTGCCT TCCGCTGGAT GTATCGGGGG AACGGGCTAT GA
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| Protein sequence | MRRLINRRPD AVTQLALMLL PFVIVVICYM VASEARLSEN PNDKLLPGWS TIAAAIERMA
FLPDPRTGNY LLWSDTVSSL TRLGIGVAVA TVIGGIFGIL QGLVPYFRAT FNAFTGVLSM
IPPLAVLPIL FIIFGLGELA KVVLVAVGIT PFIIRDLALR TAEIPHEEII KAQTLGASTW
QIILRVVVPQ MLPRLIDGVR LSLGAAWLFL IAAEAIASDS GLGYRIFLMR RYLAMDVILP
YVAWITILAF SLDLALRLFQ RVAFRWMYRG NGL
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