| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1867 |
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| Symbol | |
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| ID | 5453626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2027415 |
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| End bp | 2028095 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640877445 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_001413140 |
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| Protein GI | 154252316 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.947993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCC ATTTTCTACA TCATCCTGTC CGGCACCCGC TCGGCGAGGA ATGGCTGATG
GCCTATGCCG CCGGCGCCTT GAGCGAAGGC CAGTCGCTGC TTGTCGCCTC GCATCTGAGC
TATCTCGATG ATACCGCGTC GCGTCTCGCC GTCGCCGAGG CCGCGGGCGG CGCGCTGCTC
GAGGCCGTCG ACCCCGCGCG CATGGCGCCG GAAGCCCTGG CGAACACGCT TGCCCGCCTC
GATGAAACCC GGCAGGAAAC GAAGGCCGCA CCGCGCGCCA AGGATCAGAC GAACGACGTC
CTTCCGCCGC CGCTCCGCGC CTGGCTCGGC CGCGGCGTCG ATGAGTTGAA CTGGAGCCTT
CTCGGCCCCG GCATGAAAAA GGTGAAGCTC TGGCGCGGCG GTCCGAACGA TCAGCGCCTC
TGGATGCTCC GTGCCCGTCC CGGCATCGAA ATCCCGATGC ATGGCCATAG CGGCACCGAA
CTCGTCCTCG TCCTGAAGGG CAGCCTCGAA GACGAGCACG GCATCTTCCG CGCCGGCGAT
GTGGAGGAAA GCAATGACGA TCGCATCCAC AGCCTGCGCA CCGGCCCGGA AGAGGAATGC
ATCTGCCTCG CCGTCACCGA AGGCCCCACC CGCTTCCAGG GCTGGCTGGC CCGCGCCCTC
CAGCCCCTCA TCGGCCTGTA G
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| Protein sequence | MSAHFLHHPV RHPLGEEWLM AYAAGALSEG QSLLVASHLS YLDDTASRLA VAEAAGGALL
EAVDPARMAP EALANTLARL DETRQETKAA PRAKDQTNDV LPPPLRAWLG RGVDELNWSL
LGPGMKKVKL WRGGPNDQRL WMLRARPGIE IPMHGHSGTE LVLVLKGSLE DEHGIFRAGD
VEESNDDRIH SLRTGPEEEC ICLAVTEGPT RFQGWLARAL QPLIGL
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