| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1858 |
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| Symbol | |
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| ID | 5456100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2015643 |
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| End bp | 2017184 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877437 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001413132 |
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| Protein GI | 154252308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.412322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.198302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATCG ACGGACGCAG CCTTCCCGAG GGAACAGTCG TTGAAACCGA TCTCGCCATC
ATAGGCGCCG GCGCCGCCGG CATCTCGATC GCGCGCGAAC TGGCCGGTTC CGGCATTTCC
GTCGCCCTGC TCGAAAGCGG CGGCTTCGAG TTCGATGCCG AAACGCAGGA TCTTTATGAA
GGCGAGATGG GCGGCGTCGA TTATCCGCTC ACAAGCTCGC GGCTGCGCTA TTTCGGCGGC
ACCACAAATC ACTGGGGCGG CTGGTGCCGT CCGCTCGAGC CGCTGGATTT CGAGGAGCGC
GACTGGGTGC CGAATTCCGG CTGGCCGATC AACCGCCAGA CCCTCGATCC CTTTTACGAC
CGCGCCCGCG AGCTCTGTCA GATACCGACG GGCCATTTCG ACAATGCCGC CGCCTGGTCC
GAATATGGCG AGCCCCTGCC GCTGGCGGGC AAGGATGTCG AAACGCGCTT CTTCCTCTAC
AGCCCGCCCA CCCGCTTCGG AAAGAAATAC CGGCCGGATA TAGAGCGCGC GAAAAACATC
ACCTGCTACC TGAACAGCAA CGTGCTGGAA ATCGTACCCT CGGAAAACGC GAAGACGGTG
GAGAGCCTGA GCATGGGCAC GCTCACCGGC ATCCGCTTCA CCGTAAAGCC GAAAATCTGC
ATCCTCGCCG CCGGCGGCAT CGAGAATGCG CGCATCCTCC TCCTCTCGAA CAGCGTCCAG
AAGGAAGGCC TGGGCAACGG CAATGATGTC GTCGGCCGCT ACTTCATGGA GCATCCGCAC
ATCCCCTCGC CCGCCTCCTT CCTCATCACC GATCCCGAAC TCGTCGCCCG CTTCTACCGC
ACCTATACGC GGACGGATGA AGGCGTCATT CGCGGCTGCC TCATGTTCAC GGAAGATTAT
CTCCGCCGCA GCCGGCGCAT GGGCACCGTC CTCACCTTCG GCATGGTGCA GCCCGTCACG
GCGGAAACGG GCCGCGGCCC GGAGGAAAAA GACCCCGCCG CCTTCACCAT GCCCTCCGTG
TTGCAGCTCG CGCGCAGCAC CACCTCCACG CCTGCCACGG GCGAGGAGCT GGGCTGGCGT
CTCGGCGTCG GCTGCGCCGG CGAGCAGGAG CCGAACCCGG CAAGCCGCAT CACGCTTTCC
GAACAGAAGG ACGCGCTCGG CCTCAACCGC ACGAAGCTTT CATGGCGCCT GAAAAAAACG
GATGCCGAAA GCCTGCGCGG CAATCTCCTC GCGCTCGCCC AGGCCTTTGG CGGCTGGGGC
GAAGGCCGCG TCCGCGTCCT CTTCCCGGAG CGCGACGAAT GGACGGAGGC CGAGGGCTGG
GGCAATCATC ACCTCGGCTC GACGCGCATG TCCACCGATC CGAAGAAAGG CGTCACCGAC
GCCAATTGCC GCGTCCACGG CCTCTCGAAC CTCTATATCG CGGGTTCGTC GCTCTATCCG
ACAGGCGGCA CCGTCAATCC GACACTCACC CTCGTCGCGC TGGCGCTCCG CCTTTCCGAT
CACCTGAAGC TTCGCTTCGC GCAGACCAAC GCCGTGCAAT AG
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| Protein sequence | MFIDGRSLPE GTVVETDLAI IGAGAAGISI ARELAGSGIS VALLESGGFE FDAETQDLYE
GEMGGVDYPL TSSRLRYFGG TTNHWGGWCR PLEPLDFEER DWVPNSGWPI NRQTLDPFYD
RARELCQIPT GHFDNAAAWS EYGEPLPLAG KDVETRFFLY SPPTRFGKKY RPDIERAKNI
TCYLNSNVLE IVPSENAKTV ESLSMGTLTG IRFTVKPKIC ILAAGGIENA RILLLSNSVQ
KEGLGNGNDV VGRYFMEHPH IPSPASFLIT DPELVARFYR TYTRTDEGVI RGCLMFTEDY
LRRSRRMGTV LTFGMVQPVT AETGRGPEEK DPAAFTMPSV LQLARSTTST PATGEELGWR
LGVGCAGEQE PNPASRITLS EQKDALGLNR TKLSWRLKKT DAESLRGNLL ALAQAFGGWG
EGRVRVLFPE RDEWTEAEGW GNHHLGSTRM STDPKKGVTD ANCRVHGLSN LYIAGSSLYP
TGGTVNPTLT LVALALRLSD HLKLRFAQTN AVQ
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