| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1810 |
|---|
| Symbol | |
|---|
| ID | 5453967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1965252 |
|---|
| End bp | 1966037 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640877389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001413084 |
|---|
| Protein GI | 154252260 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5419] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.187733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.988109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGC AAAACACAGA GCAATATGAG TGGCTTCAGG CCTTATCGGC GCATGGGCTT
GCGTGGGAAT TTTTGCGCCG CAATCGCGCC TACAGGAGCG CGGCTGCAAA TCTTGGCGTG
ACGTGGCCGC CGGATGGCAG CCCGCCCGAT GAGACCTGGT CCGCCGGCGA CCAAATGTCC
GAGGCACGGG AATGGGGCTT GCTCCTTTTC GAAACGCCCG ATCGCGACGC GCGCGAGGCG
AATATTTTCT GGATGCCGGA GTTCTGCCCG AGTGTTCTTC CGGTCGTTGC GAGCCAGAAT
GTCGGTCACG TGTCGGGCCG GTTTCTGAAT TTAAGCCGCC TGCGATGCCG CAATGTCCTC
ATCCCCGGAG AAGACATTCA ACATCTTCTG TGCGCCGACC AGGGCCGGTT CCTGCAACTG
TCTGTTACTG GCGAATGCCT TACGCGCCCG GTGCAGGTGC TTGCGAACGT CTTGCCCATG
ACGCCCTATT CGGAGACAAG ATGGCGCGGC TTCAGGCGGC TGAACGACCT TGTGTGCACC
GAGACGCTAC GAACGAAATT TTATCCGCCG GACCTTGGCG CTCGACGCCT CTCCCGAGTT
CTGCAGGCGC TGGACGGCTA TCTCGCTGGA GCATCCCAGC GCGAGGTCGC GATTGCGCTG
TTCGGTGCGG AGCGTGTCGA GGCGGACTGG CGCGATCCGC GGAACCATCT CTGCGACCAA
GTGCGCCGCG CCATCAGGCG TGGCCGTGAC CTCATGAATG GCGGCTATCT GAAATTGCTG
CGGTGA
|
|---|
| Protein sequence | MKWQNTEQYE WLQALSAHGL AWEFLRRNRA YRSAAANLGV TWPPDGSPPD ETWSAGDQMS
EAREWGLLLF ETPDRDAREA NIFWMPEFCP SVLPVVASQN VGHVSGRFLN LSRLRCRNVL
IPGEDIQHLL CADQGRFLQL SVTGECLTRP VQVLANVLPM TPYSETRWRG FRRLNDLVCT
ETLRTKFYPP DLGARRLSRV LQALDGYLAG ASQREVAIAL FGAERVEADW RDPRNHLCDQ
VRRAIRRGRD LMNGGYLKLL R
|
|---|
| |