Gene Plav_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1783 
Symbol 
ID5456197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1936860 
End bp1937186 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID640877363 
Productferredoxin 
Protein accessionYP_001413058 
Protein GI154252234 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.139535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAA TCATTTTCAT CGAACCGGAC GGCGTCGAAT ATCCGATTGC GGTCAAGAGC 
GGCACAACCG CGAGGGATGC CGCAGTCAAC AACAGTGTGC CGGGTATTGA CGGCGATTGC
GGCGGCGAGT GCGCCTGCGC GACCTGCCAT GTACATGTCG ATGCCGCGTG GATGGCCCGG
ACCGGCATGG CCGAGCCGGG CGGCATGGAA GCCAACTTAC TACAGTTTGC CGAGGGTTCG
ACGGAAAACA GCCGCCTTGC TTGTCAGATC ACCATGACCG ACGATCTCGA CGGTCTCATG
TTGAGAATAC CTGACGGTCA GCACTAG
 
Protein sequence
MPTIIFIEPD GVEYPIAVKS GTTARDAAVN NSVPGIDGDC GGECACATCH VHVDAAWMAR 
TGMAEPGGME ANLLQFAEGS TENSRLACQI TMTDDLDGLM LRIPDGQH