| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1780 |
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| Symbol | |
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| ID | 5455719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1933137 |
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| End bp | 1933583 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640877360 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001413055 |
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| Protein GI | 154252231 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.840019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.113687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATTG TTGCAAAACT GCCGGAGTTC AACCAGGAAA TCGCACAGGG CTTCATAAAC
GCCAGCAATT CAATGAAAGG GTTGCCCGAG TTTCTGGGGG TCCGCATCAC GCATATCGAG
CCGGGCAAGC TCACTGCCGA GATGGAAGTC TCCGACCGGC TGTTGACGCC GATCGGAAAC
ATGCATGGTG GGGTGCTGGC TGCGATGTGC GACCATGTTC TCGGCTGCGT TTGCTATCCG
CATATGCGGA AAGGACAGTG GGCGGCCACG ACGGAATTCA AGCTCAATCT GCTGGCGCCG
GTATCGTCGG GCAAGGTGAT AGCAGTGGCC GAATTGATCG CGATGACAAA ATCGACTGCG
GTGGTTCGTA TAGATGTGAC GAACGAGGGC CGCGCCTGTT GTGCGGCCCA GGGCACCGTT
CTCATTCGCG ATCCAAAGCC CGCTTAG
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| Protein sequence | MTIVAKLPEF NQEIAQGFIN ASNSMKGLPE FLGVRITHIE PGKLTAEMEV SDRLLTPIGN
MHGGVLAAMC DHVLGCVCYP HMRKGQWAAT TEFKLNLLAP VSSGKVIAVA ELIAMTKSTA
VVRIDVTNEG RACCAAQGTV LIRDPKPA
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