| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1779 |
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| Symbol | |
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| ID | 5454280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1931955 |
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| End bp | 1933088 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877359 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001413054 |
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| Protein GI | 154252230 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.883896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0611887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGC ATAGCCGAGT ATGTGATATT CTAGGTATTA AATACCCGAT CTTGCTGGCC
GGTATGGGCG GCGCGAGCGT TCCGCGGCTT GCGGCGGCGG TATCGAATGC GGGTGGCCTC
GGTGTGCTTG GCGCGGCTGC TTGCTCTCCC GATCAGTTGC GCGAATGGAT TCGGGAAACG
CGATCGCTGA CGGACAAGCC ATTTGGTGTT GACACCCTGC TGCCAGCCTC CGTGCGTAGG
GAAGCCTACA AGGGCAAGGC GGGTCCGTCT CCGATGGATA TGCTGCCTGA GTACCAAAAA
TTCGCGCAAG ATTTTCTGAA GAAGGAAAAC ATTCCGCCGC TGAAATCCAG GGCGCGGGAA
TCCGAGGAAG CTCACCGGTC GTCAAAATCG AACGCGCCGC TGTTTTCCAA GGAATTCTTC
GAAGCGCAAA TGGAAGTCGT TGTTGAGGAG CGGGTTCCTG TCTATGCGGC GGGTCTCGGC
AATCCGGGGC CCTGGCTTGA TCGGCTCCAT GCCAACGGCA CCAAGGTGAT GGCAGTCGTC
GGCGCGGTAA AGCATGCGCT GCAGGTAGTC AATTCCGGCA TCGATCTGAT CGTTGCGCAA
GGCCATGACG GGGGCGGGCA CAATTCACCC GTCGGAACGA TGGCGCTCAT TCCGCAGGTT
GTCGATGCGA TCGCTGGCCG CATTCCAGTG CTTGGTGCGG GCGGCATTTC CGATGGGCGC
GGCATCGCGG CTGCAATGAT GCTCGGCGCC GAAGGTGCCT GGATCGGTAC GGCGTTTCTC
GCCACCGAAG AGGCGGGCAT CGAGGACTTC CAGAAGGAAG CGATTGTCGA GTCGGGTGAC
GGTGACACAC TGGTTTCTCG AACCGTCACC GGAAAGCCGG CCCGGATCAT TCGCAACAAG
TGGTCCGAGG CTTTTGTCGA GGCGGGTCTG GAGCCGTTGC CCATGCCCTT CCAACCCATG
GTTGCGATGC CGGTGCTGGC GGCGGCGGCG GCGGTAAAGC GGAAAGATAT CGCTCCCGGT
TTCGCAGGGC AGGGCATGGG TCTCATTCAC AAGGTAAGGC CGGCTGCGGA AGTCATGGCC
GATCTCGTGA AAAGCGCCGA AAACTCGTTG AGCAGCGCAA ACACCTATCT GTAA
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| Protein sequence | MTLHSRVCDI LGIKYPILLA GMGGASVPRL AAAVSNAGGL GVLGAAACSP DQLREWIRET
RSLTDKPFGV DTLLPASVRR EAYKGKAGPS PMDMLPEYQK FAQDFLKKEN IPPLKSRARE
SEEAHRSSKS NAPLFSKEFF EAQMEVVVEE RVPVYAAGLG NPGPWLDRLH ANGTKVMAVV
GAVKHALQVV NSGIDLIVAQ GHDGGGHNSP VGTMALIPQV VDAIAGRIPV LGAGGISDGR
GIAAAMMLGA EGAWIGTAFL ATEEAGIEDF QKEAIVESGD GDTLVSRTVT GKPARIIRNK
WSEAFVEAGL EPLPMPFQPM VAMPVLAAAA AVKRKDIAPG FAGQGMGLIH KVRPAAEVMA
DLVKSAENSL SSANTYL
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