| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1773 |
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| Symbol | |
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| ID | 5454289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1925478 |
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| End bp | 1926629 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877354 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001413049 |
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| Protein GI | 154252225 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0119557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0397341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACACG AAGCCCAGGT CGAGCAGTTG CGGAAGATCT TCGGCTATCT CGACGCGGGT
GAGACCGCGA TGGGCGATGC CGTGTATCGT CATCATGTCA GTGACTACAC CAGTCCGGAT
CAGGCTGGCC GAGAACGGGA GATGCTGTTC CGGCATGAGC CACTCCTGAT CGGATTGAGC
TGCGAATTGC CCAATCCCGG CGACTATGTA ACCGACGATT TTTCGGGCGT TCCGATCCTG
GTGGTGCGGA ATGAAGCGGG GCAGGTCAAT GCCTTCATCA ATGTCTGCCG CCACCGTGGC
GCGCGCGTTG CGTCGGGCTG CGGCAGCGGC AAGACCGTGT TCAGTTGTCC CTATCACGCA
TGGACCTACG ACCGGAGCGG CAGGCTGAGG TCGATACCGT TCGAGCAGGG CTTCGAGAGC
GTCGACAAGA CGAGCAACGG CTTGCGGCCT CTGCCGGTGG TGGAGAAATA CGGCATGATC
TGGGTCATGC CGACGCCCGG CGGGTCGATC GACATCGACG GCCATCTTGC GGGGATGGCG
GACGATCTCG TCGCGTTCGG CCTTGCGAGT TACAGCCACT ACGAGACACG CGTGCTCCGG
GCCCGCCTCA ACTGGAAGCT CGTGATCGAC ACGTTTCTCG AAACCTACCA TCTGAGCACA
CTTCACAAGA ATACGATCGC GCCGATCCTG CACTCGAACC TCGGCACGTT CGACGGCATG
GCACGAAATC TGCGCATGAT TGGCGCCCGC AAGACGATCG ACGCGTTGCG CCAGAGGCCG
GAAAGCGAGT GGGATCTGGT CCGCCACTCC GCGCTTGTAT ACGTGCTCTT TCCGAATACG
GTCTTCATCA TGCAGGGCGA TCATCTGGAG ACGTGGAGGG TTTATCCGGG CGACAGCGTG
GATGAATCAA AAATGCACGT CTCTCTCTAT ACGCCCGAAC CCGCCGTGAC CGACAAGGCC
AGAAAGTACT GGACCAAGAA CATGGACTTG CTGATGGCGA CCGTGCAGCA GGAAGATTTT
CCGCTGGCGG AAAATATCCA GCGTGATTTT CACTCGGGTG CACAAGATTT TGTGACTTTC
GGCGCCAACG AGCCGGCTCT TGCATACTTC CACCGGTCGA TAAAAAAGAC GCTGGGGATA
AACGCCGTGT GA
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| Protein sequence | MKHEAQVEQL RKIFGYLDAG ETAMGDAVYR HHVSDYTSPD QAGREREMLF RHEPLLIGLS
CELPNPGDYV TDDFSGVPIL VVRNEAGQVN AFINVCRHRG ARVASGCGSG KTVFSCPYHA
WTYDRSGRLR SIPFEQGFES VDKTSNGLRP LPVVEKYGMI WVMPTPGGSI DIDGHLAGMA
DDLVAFGLAS YSHYETRVLR ARLNWKLVID TFLETYHLST LHKNTIAPIL HSNLGTFDGM
ARNLRMIGAR KTIDALRQRP ESEWDLVRHS ALVYVLFPNT VFIMQGDHLE TWRVYPGDSV
DESKMHVSLY TPEPAVTDKA RKYWTKNMDL LMATVQQEDF PLAENIQRDF HSGAQDFVTF
GANEPALAYF HRSIKKTLGI NAV
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