Gene Plav_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1772 
Symbol 
ID5456513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1924634 
End bp1925440 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content63% 
IMG OID640877353 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001413048 
Protein GI154252224 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0766393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0633742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGG GAGGCGATAT GACTAGCGCC GCGGAAGCCC CGGTCCAGAC CGAGATGCGA 
GACGGCGTCG GAATCGTGGC GCTCAACAGG CCTGACAAGT TCAATTGCCT CTCGTCGGTT
GTCATGGCCG GTCTCGACGA GGCTCTCGCA ATGTTCGAGG GAGACAGGAA GGTTCGTGCC
GTTCTGTTGC TCGCGCGTGG CAAGCACTTC TGCACCGGTG CCGATCTTGA CGAGGTCCTC
GACGCTCGCA GGGAGCGGGG TCGGCTGGAA GCGTTTATCA CGGGCGGTCA TCGCGTCCTG
CGCCGTCTTG AGGTCTCACC TCTGCCGATT GTCGCCGCGG TGAACGGTCT GTGTCTTGCG
GGCGGGCTGG AATTGATGAT GGCATGTGAC GTGGTTTTTG CGGGGCAGTC GGCGCAGATG
GGATGCCAGC ATGCCCGCTA CGGGCTCGTG CCGGGTTGGG GCGGCACGCA GCGTCTCGCG
CGCATCGTCG GTTCGCGGCG TGCCCTTGAT CTGATGTTCA GCGGCCGCTG GCTCAAGGTA
GACGAGGCGC TGGCCTGGGG GCTTGTGAAC CATATCGTTG ACGACAGCGC GCTTGCCGGC
AAGGCGGAAG CCTATTGTGC CGACCTCGCC AAAAAGAATC CGGGCGGTCT TGCCGCCATG
AAGCAGCTTT GCAGAAACGG GCTCGACGGA TCGCTCCAGG AAGGTCTGGA TATGGAACGG
AGCGCAGTCG TGGACGCGCT GATGGGCGAA AATGTTTCGG AAGGTCTGGC GGCGTTCCGG
GAGCGCCGGG AACCATTATT CCGCTGA
 
Protein sequence
MREGGDMTSA AEAPVQTEMR DGVGIVALNR PDKFNCLSSV VMAGLDEALA MFEGDRKVRA 
VLLLARGKHF CTGADLDEVL DARRERGRLE AFITGGHRVL RRLEVSPLPI VAAVNGLCLA
GGLELMMACD VVFAGQSAQM GCQHARYGLV PGWGGTQRLA RIVGSRRALD LMFSGRWLKV
DEALAWGLVN HIVDDSALAG KAEAYCADLA KKNPGGLAAM KQLCRNGLDG SLQEGLDMER
SAVVDALMGE NVSEGLAAFR ERREPLFR