Gene Plav_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1725 
Symbol 
ID5453977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1865436 
End bp1865969 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID640877300 
Producthypothetical protein 
Protein accessionYP_001413001 
Protein GI154252177 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGG AACAGCCAGA TATATTGCAA GCCGCCGGCA CGAAGCGGTT TTTTGAATAC 
TGGAACCATC TTCCGAAGAC GGGTGTTGCC CCGGATCGCC GCGACTTCAA TCCAGCGCGC
ATAGCCGCCC TTATGCCGGC CGTGACGCTG CTCGAAATCT TTTCCGATAC GCAGGTTTTG
CAGCGCCTGA CCGGCACGGG CGTATGCAGG GCCATGGGCT TCGACCCGAC AGGGAAGAAC
ATGCTGGAGC TGATGGCGCC GGAGTTGCGG TCGGATTATG TGAAGCTCAT CCAGACTCAG
CTTTCTTATC CCTGTGGCCG GTGGAATATC ATCCGCAGCC GGCGCGAGAG CATGATAGAT
CGCGCCGAGG TGCTGACGCT GCCGCTGCGT TATGGGCCCT CGGACCGCTG GATGATCTTG
TCCTATTTCG GCGGCATCGG CGCCGTCGCC TATGAGCCCG GTCCATACGA GATCCTTGGC
TACGAGGAAA CGCAGTGGCT GGATATCGGC GCAGGTATTC CTGACCGCGT CTAA
 
Protein sequence
MLAEQPDILQ AAGTKRFFEY WNHLPKTGVA PDRRDFNPAR IAALMPAVTL LEIFSDTQVL 
QRLTGTGVCR AMGFDPTGKN MLELMAPELR SDYVKLIQTQ LSYPCGRWNI IRSRRESMID
RAEVLTLPLR YGPSDRWMIL SYFGGIGAVA YEPGPYEILG YEETQWLDIG AGIPDRV