| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1712 |
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| Symbol | |
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| ID | 5454727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1851796 |
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| End bp | 1853712 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877287 |
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| Product | cobalt chelatase, pCobT subunit |
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| Protein accession | YP_001412988 |
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| Protein GI | 154252164 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.220052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.634495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGA AGGAAAGCCC CGTCGAACCG TTCAAGCGTG CGCTCACGAT GACGATGCGC
ACGATCGCGG AACAGCCGGA GCTCAATGTC AGCTTTGGAA CGGAAGCGCC GGGCCTGCGC
GGCCTGCGCG CGCGGCTGCC CCTGCCGAGC CGCACCCTGC CGCCCGAAGA AGTGGCGCAG
GTACGCGGCG TCTCGGACGC CTATGCTCTC CGCCTCGCCC ATCACGACGA GAAACTGAAC
GCGAATTATC AGCCCGAAGG CGGCAATGCG CTGGCGGTCT TCGACGCTGT CGAGCAGGCA
CGCTGCGAGG CGATCGGCGC CAACCAGATG GCCGGCGTTT CCCAGAACCT GACCGCCGCC
CTCGAACAGC GCTGCGCCGC GCGCGGCTAT GATCGCATCA CCTCACGCGA GGAAGCGCCG
CTTTCCGAAG CCGTCGCGCT GATGGTGCGC GAGAAGCTGA CGGGCGAAGC ACCGCCGCAA
TCGGCGCAGA AGCTCCTCGA CCAGTGGCGC CCCTGGATCG AGGAGAAGGC GGGCTCCGAC
CTCGACCGGC TTCAAGACCT GATCGAGGAT CAGGCGGCCT TTGCGCGCGC CACACGCGAC
ATCCTCGTCG ATCTCGACAT GGGCGACGAA CTGGGCGAAG CACCCGACCA GTCTTCGGAC
GATGCCGACG AGCAGGAAGG CGACAGCGAG GACAGCTCCG ACCAGAGCCA GTCCGGCGAA
GCCGAACAGC CCGAAGGCGC TTCCGCCGAC CAGGTCGAAT ATTCGGAAGG CGAAGGCGAG
GAAGGCGACG AGCAGACCGT CGAGGTCGAA TCCGACGACG CGCCGATGGA CGGCGACACG
GACGAGACGA GCGAGGGCAA CCAGCCGTGG CGGCCGAACC AGCAGGGCGA CGACCGCAAC
CGGCTCTCCT ACAAGATTTT CACGCCGCAA TTCGACGAAG TCATCATGGC GGAGGATCTC
TGCGACATCG ATGAACTGTC GCGGCTGCGG CAATATCTCG ATCAGCAATT GCAGCAGATG
CAGGGCGTCG TCTCGCGGCT CGCAAACCGC CTGCAGCGCC GCCTTCTCGC GCAGCAGAAC
CGGACATGGG AGTTCGATCT CGAGGAGGGC ATTCTGGATG CAGGGCGCCT GACGCGCGCC
GTCGTGGACC CGATGCAGCC GCTTGCCTTC AAGGTCGAAC ACGATACGAA TTTCCGCGAC
ACCGTCGTGA CGCTGCTGCT CGACAATTCA GGGTCGATGC GCGGACGGCC GATTACGGTC
GCGGCGATGT GTGCCGATAT TCTGGCGCGG ACGCTCGAAC GCTGCGGCGT GAAAGTGGAA
ATCCTCGGCT TCACCACACG CGCCTGGAAG GGTGGGCAAT CCCGCGAGCG GTGGCTCGCC
GAAGGAAAAC CCGCGCAGCC GGGCCGCCTG AACGATCTCC GGCATATCAT CTACAAGGCG
GCGGACAGCC CCTGGAGGCG CGCGCGGCGC AACCTCGGCC TGATGATGCG CGAAGGATTG
CTGAAGGAGA ATATCGACGG CGAGGCGCTG ATCTGGGCGC ATAACCGGCT GCTCGCGCGG
CCGGAGCAGC GCCGCATTCT GATGGTGATT TCGGATGGCG CGCCGGTCGA CGATTCGACG
CTGTCGGTGA ACGCCGGAAA CTATCTGGAA AAGCACCTGA GAAGCGTCAT CGACCAGATC
GAAAACCGCT CGCCGGTCGA ACTGATCGCC ATCGGCATCG GCCATGACGT GACGCGCTAC
TATCGCCGCG CCGTGACCAT CGTCGATGCC GAGCAGCTCG GCGGCGCGAT GACCGAAAAG
CTCGCCGAAC TTTTCGACGA CGAAGCGACA TTGCGCCGAG GCGAATTGAA AGCCCGTGGA
CAACTGGGGC CGAAAAAGGC CGGTGGCGGA GCGCGCGCGG CACGCGCCTT CCGCTAG
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| Protein sequence | MKSKESPVEP FKRALTMTMR TIAEQPELNV SFGTEAPGLR GLRARLPLPS RTLPPEEVAQ
VRGVSDAYAL RLAHHDEKLN ANYQPEGGNA LAVFDAVEQA RCEAIGANQM AGVSQNLTAA
LEQRCAARGY DRITSREEAP LSEAVALMVR EKLTGEAPPQ SAQKLLDQWR PWIEEKAGSD
LDRLQDLIED QAAFARATRD ILVDLDMGDE LGEAPDQSSD DADEQEGDSE DSSDQSQSGE
AEQPEGASAD QVEYSEGEGE EGDEQTVEVE SDDAPMDGDT DETSEGNQPW RPNQQGDDRN
RLSYKIFTPQ FDEVIMAEDL CDIDELSRLR QYLDQQLQQM QGVVSRLANR LQRRLLAQQN
RTWEFDLEEG ILDAGRLTRA VVDPMQPLAF KVEHDTNFRD TVVTLLLDNS GSMRGRPITV
AAMCADILAR TLERCGVKVE ILGFTTRAWK GGQSRERWLA EGKPAQPGRL NDLRHIIYKA
ADSPWRRARR NLGLMMREGL LKENIDGEAL IWAHNRLLAR PEQRRILMVI SDGAPVDDST
LSVNAGNYLE KHLRSVIDQI ENRSPVELIA IGIGHDVTRY YRRAVTIVDA EQLGGAMTEK
LAELFDDEAT LRRGELKARG QLGPKKAGGG ARAARAFR
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