| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1683 |
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| Symbol | |
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| ID | 5456296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1820510 |
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| End bp | 1820974 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877257 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001412959 |
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| Protein GI | 154252135 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.083684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.174772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGA CCGTCCAGCC GCCGCGAAAC TTCGACGACG CCAATCCGGA AGACGGGCTC
GGCGGCGCTC TCGGCATCGT CCGTACACTG TATATGGACG CCGAAAAGGG CCGTGCCGCC
ATAGAATGCC GCGCTGAAAT GCGCATGTGC CATTCGGGCG GCGTGGTGCA GGGCGGCTTC
GTCACCGGCT GGATCGACGC GGCGATGGCG CGCGCCGCCA TGTGCGCGAC GGAATTCAAG
CAGACGCCGA TGTCGCTCGA AATCAAGATC AGCTTCTTCC GTCCCGCGCA GCCGGGGCTC
TTGAAGGCGG AAGCCTGGAT CGAGCGGCGT GGCCGCTCCA CCATGTTCCT CGAAGGCCAT
CTACTGGATG CCTCCGGCGA AGTGCTCGCA AAGGGCACCT CCACCGTACG CATGATGCCG
CTGATCGACA TGAGCAAGCC GCGCGATAAA TCCGTAAACG GATAA
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| Protein sequence | MSETVQPPRN FDDANPEDGL GGALGIVRTL YMDAEKGRAA IECRAEMRMC HSGGVVQGGF
VTGWIDAAMA RAAMCATEFK QTPMSLEIKI SFFRPAQPGL LKAEAWIERR GRSTMFLEGH
LLDASGEVLA KGTSTVRMMP LIDMSKPRDK SVNG
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