Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1681 |
Symbol | |
ID | 5455002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1819086 |
End bp | 1819646 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640877255 |
Product | hypothetical protein |
Protein accession | YP_001412957 |
Protein GI | 154252133 |
COG category | [S] Function unknown |
COG ID | [COG5388] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0467098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.109916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAATG ACGAGCGATC CGCGCCGGCT GGGGGCGCCG CGCCTCGGGT GCCGCCTTCG GCGGCGGTTC AGGCGGAATA TTGGGGTGAG CCGGAGACGA TCCGGCCGCA TCTGACCGCG CAGGCGCCGC TCGCCGTTCT CGATTACTGG CTGGAGCTTC GCGGCACGCG TCCCTTTCCC TCGCGCGGGC AGTTCAATCC GATGGCGATG CGCCGCTATC TGCCCAACAT CTTCCTGCTC GATGCGGCGC CCGATGGCAG TTTCCGCTAC CGCGTCGTCG GCTCGCTCAT TTCGGAATTT TTCGGCGTCG GCAATCCCTC CGGCATGACG CCGGAAGATG TCTTCGGCGC CAATGCCGAG GTCGCGCTGT CGCCGCTGCG CATCTGCCGC GATGGCCGAG CGCCCTATAT GCATACGGCG TCCGCGAGCT GGCTCTATCG CGATCGCACC TATGTCTTCT ACACCGCGCT GCTCCTCCCC TTCGGCGAGA GCGACGATGC CGTCGACAAG ATCCTCTGCT GCGCCGAATT CCTCAGCGAG GAAGAAGCGG CCCGCACCTG A
|
Protein sequence | MSNDERSAPA GGAAPRVPPS AAVQAEYWGE PETIRPHLTA QAPLAVLDYW LELRGTRPFP SRGQFNPMAM RRYLPNIFLL DAAPDGSFRY RVVGSLISEF FGVGNPSGMT PEDVFGANAE VALSPLRICR DGRAPYMHTA SASWLYRDRT YVFYTALLLP FGESDDAVDK ILCCAEFLSE EEAART
|
| |