Gene Plav_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1681 
Symbol 
ID5455002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1819086 
End bp1819646 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID640877255 
Producthypothetical protein 
Protein accessionYP_001412957 
Protein GI154252133 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0467098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.109916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG ACGAGCGATC CGCGCCGGCT GGGGGCGCCG CGCCTCGGGT GCCGCCTTCG 
GCGGCGGTTC AGGCGGAATA TTGGGGTGAG CCGGAGACGA TCCGGCCGCA TCTGACCGCG
CAGGCGCCGC TCGCCGTTCT CGATTACTGG CTGGAGCTTC GCGGCACGCG TCCCTTTCCC
TCGCGCGGGC AGTTCAATCC GATGGCGATG CGCCGCTATC TGCCCAACAT CTTCCTGCTC
GATGCGGCGC CCGATGGCAG TTTCCGCTAC CGCGTCGTCG GCTCGCTCAT TTCGGAATTT
TTCGGCGTCG GCAATCCCTC CGGCATGACG CCGGAAGATG TCTTCGGCGC CAATGCCGAG
GTCGCGCTGT CGCCGCTGCG CATCTGCCGC GATGGCCGAG CGCCCTATAT GCATACGGCG
TCCGCGAGCT GGCTCTATCG CGATCGCACC TATGTCTTCT ACACCGCGCT GCTCCTCCCC
TTCGGCGAGA GCGACGATGC CGTCGACAAG ATCCTCTGCT GCGCCGAATT CCTCAGCGAG
GAAGAAGCGG CCCGCACCTG A
 
Protein sequence
MSNDERSAPA GGAAPRVPPS AAVQAEYWGE PETIRPHLTA QAPLAVLDYW LELRGTRPFP 
SRGQFNPMAM RRYLPNIFLL DAAPDGSFRY RVVGSLISEF FGVGNPSGMT PEDVFGANAE
VALSPLRICR DGRAPYMHTA SASWLYRDRT YVFYTALLLP FGESDDAVDK ILCCAEFLSE
EEAART