| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1672 |
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| Symbol | |
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| ID | 5454345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1807427 |
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| End bp | 1808239 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640877246 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_001412948 |
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| Protein GI | 154252124 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.793356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGCC GGCAACCGGG AACGAAACAG GTCCACGCAG GCGAGCTCGA TCCTCGGGCC
TTCCACGCGC CTGTCCGGGC CCTCCGCAAT GCCGAAACGC TGGCCGATGC CGAGGCCGCC
CTTGCCGCCA TTTCCGGCCT CCTCGCCATG CCGCGCCTCG TCTGGACGCC GGATGTCGCC
TCGCCGCTTC AGGAGCCGGG CGCCGAGGCC TTCATGCGCC GCCAGGGCTG GGCGGATGAT
GTCATTGCCG CGATGTGGGA AGATGGCGTG CCGCTCCGCA TGCCGGTTCA CATCCGCTGC
CGCTTCGAGC ACACGCCTTT CGCCATCACG CTTTACGACG AACACAGGAA GCGCCGTGCG
CCCTACAAGG GCGTGCAGAA GCGTGTCGCC GACATGATCG CGGCGCTCGG TTTCAATTCG
CTCTTGATCG TCCCCGTCCA TCTGCCGCGC GCCCGGGTCG CGATGCTCGG CTGGTGCGGG
CCGCAGATGC TGGATGAAGC GGAGACGCTG CTCGCCGCCG CCGCGCCGGA TCTCCTCGCC
GCCGGCCATT ATTTCGCGGC GCTGTTCGAC CGGCTGTCCG GCCGCGATCC GGTCCGCGAG
GAAGAGCGCG CCCGGCTCAC GCAGCGCGAA TGGGATTGCC TGCGCCTCAC TGCGCAGGGC
TATCGCGAGG CGGATGTCGC GGAGATGAAC GGCATCGCCG CCACCACCGT CCGCTATCAC
CTCGACAATG CAGTGGCGAA ATTCGGCGCC CGCAACCGCG CCCACGCCGC CGCCATTGCC
GCGCAGCTCG GGCTTGTGGG CAAGCTCTCC TAG
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| Protein sequence | MVGRQPGTKQ VHAGELDPRA FHAPVRALRN AETLADAEAA LAAISGLLAM PRLVWTPDVA
SPLQEPGAEA FMRRQGWADD VIAAMWEDGV PLRMPVHIRC RFEHTPFAIT LYDEHRKRRA
PYKGVQKRVA DMIAALGFNS LLIVPVHLPR ARVAMLGWCG PQMLDEAETL LAAAAPDLLA
AGHYFAALFD RLSGRDPVRE EERARLTQRE WDCLRLTAQG YREADVAEMN GIAATTVRYH
LDNAVAKFGA RNRAHAAAIA AQLGLVGKLS
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