| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1666 |
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| Symbol | |
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| ID | 5455011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1798698 |
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| End bp | 1799477 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877240 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001412942 |
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| Protein GI | 154252118 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01458] HAD-superfamily subfamily IIA hydrolase, TIGR01458
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.307803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGA AAACAAGGCC GCTTGAGGAA ATCCGGGGAT TGCTGCTCGA TGTGGGCGGC
GTTCTCTATC AAGGCAGCGA GGCGCTGCCC GGCGCCGTCG AAGCCGTTCG CCACCTGCGC
GAGCGGCAGA TGCCGTTCCG GCTGCTGACC AACACGACGC GGACGACAAG GGCCGGACTG
ACGAAACGGC TGGCGGAGAT GGGTTTCGAT GTCGGCGAAA ACGACATCGT GACGCCGGCG
AGCATTGCAG CCTCCGTGCT TGAGCGGGAC GGCGCAAGCG CACATCTCCT CGTTCATCCA
GACCTTCTGC CCGACTGTCC GCCGGAAGCA ACAGCGCCGA ACGCCGTGCT GATGGGCGAT
GCGGGCGAGT ATTTCACCTT CGAGCGGCTG AACCGCGCTT TCCGCATATT GGTGGATGGC
GGCCGGCTTT ATGCGCTCGG CAAGAACCGT TTCTTTCGCG GCGAAGACGG TTTCGAACTG
GATGCCGGGC CTTTCGTTGC CGCGCTCGAA TATGCAGCGG AGGTGGAAGC AGAGCTGATC
GGCAAACCCG CCCGCGATTT TTTCACGACG GCGGCAGCGG AATTGGACCT GGCGCCGGAA
GAGGTGGCAA TGGTGGGAGA CGATCTCGAA AGCGACATTG AGGGCGCACT CGCCGCCGGG
TTGCAGGCGG TGCTGGTCAG GACCGGCAAA TATCGCGACG GAGACGGTTC AAAAGCAAAG
AGAGGCGGCG CACATGTCGC CGCCTCCCTG GCCGAATTCG TGGATGAATT GTTGGCCTAG
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| Protein sequence | MTPKTRPLEE IRGLLLDVGG VLYQGSEALP GAVEAVRHLR ERQMPFRLLT NTTRTTRAGL
TKRLAEMGFD VGENDIVTPA SIAASVLERD GASAHLLVHP DLLPDCPPEA TAPNAVLMGD
AGEYFTFERL NRAFRILVDG GRLYALGKNR FFRGEDGFEL DAGPFVAALE YAAEVEAELI
GKPARDFFTT AAAELDLAPE EVAMVGDDLE SDIEGALAAG LQAVLVRTGK YRDGDGSKAK
RGGAHVAASL AEFVDELLA
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