| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1653 |
|---|
| Symbol | |
|---|
| ID | 5453419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1786759 |
|---|
| End bp | 1788078 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640877227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001412929 |
|---|
| Protein GI | 154252105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG GCGGAGGATG GATCGGCACT TCTCTCTTCG TTCTGTCGAT AGCCCTCATT
GCCTTTCTTG TCGGGGCTTA CGTCATAATC GCAAAAGTCC CGCCTTACCG GCTGCTGACA
AATGCACATG AAGCGGCTGT GGCGCTTTAC GCTAAATCGA CGCAGTACAG CGATCCATAC
AAGACGGACC TCTGGTACGA AGCGAGAAAC GACAACAGGG GTGTCGTCAC ATATCTCGCC
GACCGGGCAC ACAACGGCTA CACGCTCTAC ACATCGTCCC ATGAAGCCAG CGCATTCCTG
GTCGATATGT CCGGTAAAGA GGTGCACCGC TGGCATGTGC CCCCCGAGGA AATATGGGAC
GGGAAACGAG AAGCAGCCGG AGCCATCGGT CCGTTCGTTT ACATACGCAA GTCCTACATG
TTTCCGAATG GCGATCTGCT GGCTCTCTAT GAAGGGTCTG GCGACACGCC TTGGGGCCTT
GGCCTCGTGA AACTCGACAA GGAATCGAAT GTTCTCTGGA CTTATCTGGA CGAGCGCGCG
CATCACGATC TCGATGTCGG CCCCGACGGA AAAATCTATC TCCTGACGCA TGAAATGCGG
CATGAGCCCG TGCCGGAACA GGGAAATCTC GAAACTCCGC TTATCGAGGA TTTTCTGACA
ATTCTTTCGC CCGATGGAGA TGTGCAGAAA CGGTTTTCGT TACTCGATGT AATCGCCGAG
TCGCGCTTCA AATGGCTCTA TGGCGGCCTT ACGCGCCGCG CCGCGCAAGA TCCCCTTCAT
AGCAATTCGG TGAAGTATGT GGGCGCAGAA GCGGGCGATG CCATGAACAT CGCGCGGGAA
GGCGATTTGA TGATCTCTTT CCGCAACATC AAGCTTGTCG GCGTTCTCGA TCCCGAGAAA
GAGGAAATTG TCTGGGGCAC GACTGGTCCG TGGATCGGCC AGCACGATGC CGAGCCGCTC
GCGAACGGCA ACATTCTCCT CTTCGACAAT GGCGGAAACT TCAACGGCCC CGCTGGCTCT
CGCGTCATCG AGTTCAAGCC CGAAACAATG GAGATCGTCT GGCAATATGA GGGGTCGGAA
CAGGACCCCC TCAAAAGCGT TCTTCGTTCT GAAGCTGCGC GGCTGGAGAA CGGCAATACG
CTCATTACCG AGTCTGAAGC GGGCCGCTTT CTGGAAGTGA CGCCCGAAGG AGAAATTGTC
TGGGAATACG TCAATCCTGT GCGCGGCGGC GACGGCGACA AGCAGATACC GATTGTCGCC
TGGGCCAAGC GCTACACGCC GGAGGAGATC GATGCTTCTT TCAGGCCGGT GTCGAATTGA
|
|---|
| Protein sequence | MSDGGGWIGT SLFVLSIALI AFLVGAYVII AKVPPYRLLT NAHEAAVALY AKSTQYSDPY
KTDLWYEARN DNRGVVTYLA DRAHNGYTLY TSSHEASAFL VDMSGKEVHR WHVPPEEIWD
GKREAAGAIG PFVYIRKSYM FPNGDLLALY EGSGDTPWGL GLVKLDKESN VLWTYLDERA
HHDLDVGPDG KIYLLTHEMR HEPVPEQGNL ETPLIEDFLT ILSPDGDVQK RFSLLDVIAE
SRFKWLYGGL TRRAAQDPLH SNSVKYVGAE AGDAMNIARE GDLMISFRNI KLVGVLDPEK
EEIVWGTTGP WIGQHDAEPL ANGNILLFDN GGNFNGPAGS RVIEFKPETM EIVWQYEGSE
QDPLKSVLRS EAARLENGNT LITESEAGRF LEVTPEGEIV WEYVNPVRGG DGDKQIPIVA
WAKRYTPEEI DASFRPVSN
|
|---|
| |