Gene Plav_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1641 
Symbol 
ID5456961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1775508 
End bp1776302 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID640877215 
Producthypothetical protein 
Protein accessionYP_001412917 
Protein GI154252093 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5031] Uncharacterized protein involved in ubiquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG CAAGCCCAGC AGAGTTTCAA GGCAAGCCTG CGGCGAAGCC GCGCCGGAAG 
CGCATCGAGC CTCTCAAGGC GCTGCGCGCT ATTCGTGCTC TCATTGCGGA CAAGGAAGAC
ACTTCGCAAG TCTTCAAGAT TATCGACGCA CTTTCCGGCA ATTCCACGGA CAGGCAGTTC
ATTCGCTTCA TGAAGACGGA AAGCGGCAAG CGCATTGTCG CCGACAAGCG GGACCTGATC
GCCGCCCTCA ATGATCGCGC TTATCTGTCG AGTCTCCCGG AAGGGACGCT CGGCCGCACC
TATTATGCGT TCATGGCCGA AGAGAACCTG ACGGCCGATG GTCTCGTTGC CGCCAGCGAG
GAAGTGCGGG TGCGCGAAGA GCGTTCGGAA GCGCAACGCA TTTTCGGCGA GCGGCTTCGC
GACCAGCACG ATCTGTGGCA CGTCACCACC GGCTATGGGC GAGATGGGCT CGGCGAACTG
GCGCTGCTTG CTTTCACCTA TGCGCAGACA CGCAATCGTG GCATCGGCTT CATCGTCCTC
GTCGGTGCGC GCGTGACGGC CAAGCATGTG CCGAATGCGG GCATCTGGCG CGTGGTGCGC
GAAGGATACC GGCATGGCAA ACAGGCTGCA TGGCTGCCGC AGACCGATTG GGAAGCGATG
CTCGCGAAGC CGCTGACGGA AGTCCGTGCC CTTCTGAAAA TTGAAGAACC GGCCGTCTAC
CGGGCGGTTG AGCCGATTAC ATCAGCCGCC GAACAGGTTT ACCGCGAGAA CGGCAAGCTC
AAGAAAGCCG CCTGA
 
Protein sequence
MTIASPAEFQ GKPAAKPRRK RIEPLKALRA IRALIADKED TSQVFKIIDA LSGNSTDRQF 
IRFMKTESGK RIVADKRDLI AALNDRAYLS SLPEGTLGRT YYAFMAEENL TADGLVAASE
EVRVREERSE AQRIFGERLR DQHDLWHVTT GYGRDGLGEL ALLAFTYAQT RNRGIGFIVL
VGARVTAKHV PNAGIWRVVR EGYRHGKQAA WLPQTDWEAM LAKPLTEVRA LLKIEEPAVY
RAVEPITSAA EQVYRENGKL KKAA